Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 757 a.a., Ferric iron ABC transporter, permease protein from Variovorax sp. SCN45

 Score =  186 bits (471), Expect = 4e-51
 Identities = 167/549 (30%), Positives = 254/549 (46%), Gaps = 47/549 (8%)

Query: 59  LMLLFIVAPLAAMLLKSVQNGQGEFVGLAYFAQYFSS-----AALWQSLR-----NTLVL 108
           LM LFI  P++  L  +  N  G++   A+ A+ F+        L   +R     NTLVL
Sbjct: 187 LMALFIAYPVSKALSGAFFNEDGQWSITAFVARVFTERIWGLGCLSGGVRCGVAWNTLVL 246

Query: 109 GISVTAIVGILAFGYAYALTRSCMPGKHLFRVLGSAPILAPSLLPAISLIFLFGNQGM-- 166
            +   A    L    A    R    G+   RVL   PI+ P  +  + LI LFG  G+  
Sbjct: 247 ALLTAAGTTFLGTLMALMAERGSKRGQGALRVLALLPIITPPFVVGLGLILLFGRAGIVN 306

Query: 167 --LKSWLGGES---IYGGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAARALKTSPI 221
             L+S  G E     YG  G+ +  +F   P A MI+   +      L EAA+ L+    
Sbjct: 307 QVLESVFGIEPTRWFYGMPGVLVAQLFAFTPIAFMIMRGVVQGIAPSLEEAAQMLRADRR 366

Query: 222 KTFFIVTLPAAKYGLISALIVVFTLVVCDFGVPKVIGGSYNVLATDIFKQVVGQQNFAMG 281
           +TFF +TLP  K GL +A +V F   + DFG P V+GG ++VL+TDIF  +VG Q +  G
Sbjct: 367 RTFFTITLPLLKPGLANAFLVGFIESIADFGNPVVVGGQFSVLSTDIFFAIVGAQ-YDQG 425

Query: 282 AVTSI--VLLLPAVFAFIADRWVQKKQQSLFDTRSVAYQPAPHRLRDGL-CLLYCVLI-C 337
              S+  VL L A+  F   R +  K Q+               L DG+   +YC+ +  
Sbjct: 426 RAASLAWVLTLFALGVFALQRGLLGK-QNYTTVSGKGDAGIAMALPDGVRRTIYCIAMPW 484

Query: 338 VAIVAVL-ATAVYGSLVTFWPWNTALTLKHYQFAETSAYG----------WSPYFNSLTL 386
           +A  AV+   A  G  V  W  + + TL H++ A    +G          W+    +L L
Sbjct: 485 IAFTAVVYLFAFAGGFVQTWGRDYSFTLNHFKSAFALEWGQFGLVWAGTAWNSLITTLKL 544

Query: 387 AS----LTALCGTVIIFLGAYSIEKGRVFALLRQAMQMLSMVPMAVPGLVLGLGYIFFFN 442
           A     +TA  G +I +L A +  KG      +   +  +++  A+PG VLG+ YI  FN
Sbjct: 545 AGISAPITAALGLLIAWLLARNEFKG------QGLFEFGALLAFAIPGTVLGVSYILAFN 598

Query: 443 HASNPLNGLYGGMLLLVINTVVHYYTVGHMTAVTALKQLPPELEATAASIKLPQYRLLWK 502
               P   L G  L++V+  +     VG      A KQL   L+  +  ++    + L+K
Sbjct: 599 ---VPPFELTGTGLIIVLCFMFRNLPVGVRAGTAAFKQLDRSLDEASLMLRASTSQTLFK 655

Query: 503 VTLPVSLPAVLDIASYLFINALTTTSAVVFLYSTDTVPASVAVLNMDDAGQTGAAAAMAV 562
           V LP+  PA++    Y F+ A+TT SAV+FL + +   A+  ++     G  G A A   
Sbjct: 656 VVLPLLKPALVAALVYSFVRAMTTVSAVIFLVTAENELATTYIIGRVGNGDYGIALAYCT 715

Query: 563 MIMLSAALA 571
           ++M+  +LA
Sbjct: 716 VLMILMSLA 724