Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 563 a.a., hypothetical protein from Variovorax sp. SCN45

 Score =  122 bits (307), Expect = 3e-32
 Identities = 135/549 (24%), Positives = 233/549 (42%), Gaps = 31/549 (5%)

Query: 56  LLSLMLLFIVAPLAAMLLKSVQNGQGEFVGLAYFAQYFSSAALWQSLRNTLVLGISVTAI 115
           L+ L++L +  P+  ++  S     G     +Y A    S  L Q+L N+  LG++VTAI
Sbjct: 20  LILLLILLVANPILRLIWDSFHTADGTLSFSSYAAALGRSRNL-QALLNSFYLGVAVTAI 78

Query: 116 VGILAFGYAYALTRSCMPGKHLFRVLGSAPILAPSLLPAISLIFLFG-NQGML-KSWL-- 171
              L    A A++R+ MP +    V   A  + P+ L AI+ I L G N G L + W   
Sbjct: 79  AIALGVPLALAVSRTNMPARGFTHVSVLAAFVMPNFLGAIAWILLAGPNAGWLNRLWSEV 138

Query: 172 -----GGESIYGGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAARALKTSPIKTFFI 226
                G  +I+   G+   +  +T+P   +   ++L      L +AA       ++T   
Sbjct: 139 LGTDRGPFNIFSFWGLAFVIALYTYPLIYVFTKSALDLVSTELEDAASIHGAGKLRTLTR 198

Query: 227 VTLPAAKYGLISALIVVFTLVVCDFGVPKVIG--GSYNVLATDIFKQVVGQQNFAMGAVT 284
           VTLP     ++ A I++F   V  +G P +I      N+  T I             A  
Sbjct: 199 VTLPLVLPSIVGAAILIFLESVALYGTPALIAIPAGLNLATTQIVSFFEYPLKVEQAAAF 258

Query: 285 SI-VLLLPAVFAFIADRWVQKKQQSLFDTRSVAYQPAPHRLRDGLCLLYCVLICV-AIVA 342
           S+ +L L  V  ++  R + +K       +    +P        + L Y  L+ +  +V 
Sbjct: 259 SMPILALTVVMLYLQRRLLARKGFVSVSGKGGERRPFDVGAWKWVLLGYSALVSLLTVVM 318

Query: 343 VLATAVYGSLVTFWPWNTA---LTLKHYQ---FAETSAYGWSPYFNSLTLASLTALCGTV 396
            L   V  SL   W    +   LT  ++    F + +    S   N++T +++TAL    
Sbjct: 319 PLIILVLASLSKAWGRGFSAGNLTFANFYNIFFEQLTVR--SALVNTVTYSAVTALVCVA 376

Query: 397 IIFLGAYSIEKGRVFALLRQAMQMLSMVPMAVPGLVLGLGYIFFFNHASNPLNGLYGGML 456
           +    AY+ +  R        +Q L++ P+AVPGL+L +G   +  +A  P + LYG   
Sbjct: 377 MGMCVAYATQ--RRITPFPTLIQFLALAPVAVPGLILAIG--LYAAYAGPPFS-LYGTGA 431

Query: 457 LLVINTVVHYYTVGHMTAVTALKQLPPELEATAASIKLPQYRLLWKVTLPVSLPAVLDIA 516
           L+V+     +  +        ++ L PELE     +   +   L KV +P+    ++   
Sbjct: 432 LVVVAFTTRFLPIAVTACGAGVRSLNPELEEAVRILGGGRLTALGKVVVPLLNKTLVGAF 491

Query: 517 SYLFINALTTTSAVVFLYSTDTVPASVAVLNMDDAGQTGAAAAMAVMIMLSAALAKLLHV 576
             +F+      S  VFL    +   SV  L++ + G   + AAM V++++   L     V
Sbjct: 492 ILVFVICTKELSTAVFLTGPASRVVSVLTLDLSEQGNYESLAAMGVVLVVIVTLV----V 547

Query: 577 GLEFGLFGR 585
           G+   + GR
Sbjct: 548 GIGMRIAGR 556