Pairwise Alignments

Query, 592 a.a., putative 2-aminoethylphosphonate ABC transporter permease subunit from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score = 81.3 bits (199), Expect = 5e-20
 Identities = 63/249 (25%), Positives = 116/249 (46%), Gaps = 17/249 (6%)

Query: 53  LLILL---SLMLLFIVAPLAAMLLKSVQNGQGEFVGLAYFAQYFSSAALWQSLRNTLVLG 109
           LL+LL     +L+F   PL + L+ S +   G F  L ++ + F+ A++ + L  ++  G
Sbjct: 13  LLLLLPGVGYLLVFFGGPLLSALIGSFRQEDGSFT-LMFYQRIFTRASMIRGLTTSIYYG 71

Query: 110 ISVTAIVGILAFGYAYALTRSCMPGKHLFRVLGSAPILAPSLLPAISLIFLFGNQGMLKS 169
           + +  IV + A      L R    G+ LF  L   P+  P ++  + +I +F   G L  
Sbjct: 72  V-MPVIVSLAASVPLALLIRRSFLGRKLFSGLYKLPMAVPGIIVGLMVIVVFERGGFLDR 130

Query: 170 WLGGESIY--------GGLGITLGLIFWTFPHALMILTTSLSTSDARLYEAARALKTSPI 221
            +    +          G+G+ L  ++   P   +I+T++ +     +  A R L  S +
Sbjct: 131 LVAPLGLELPKLVRDGWGIGVILASVWKQIPFMTLIITSAFAAIPEDIRYALRTLGASRL 190

Query: 222 KTFFIVTLPAAKYGLISALIVVFTLVVCDFGVPKVIG----GSYNVLATDIFKQVVGQQN 277
           KTFF V +P A  G+ +A+++ F   +  + +P ++G       +VL    F Q    Q 
Sbjct: 191 KTFFFVEVPLAMPGITAAILLTFIGSMGSYAIPDIVGPPTARPLSVLMIQEFNQGRFNQV 250

Query: 278 FAMGAVTSI 286
           +AMG + S+
Sbjct: 251 YAMGMILSL 259



 Score = 38.5 bits (88), Expect = 4e-07
 Identities = 35/179 (19%), Positives = 75/179 (41%), Gaps = 18/179 (10%)

Query: 415 RQAMQMLSMVPMAVPGLVLGLGYIFFFNHAS------NPL---------NGLYGGMLLLV 459
           R+    L  +PMAVPG+++GL  I  F           PL         +G   G++L  
Sbjct: 96  RKLFSGLYKLPMAVPGIIVGLMVIVVFERGGFLDRLVAPLGLELPKLVRDGWGIGVILAS 155

Query: 460 INTVVHYYTVGHMTAVTALKQLPPELEATAASIKLPQYRLLWKVTLPVSLPAVLDIASYL 519
           +   + + T   +   +A   +P ++     ++   + +  + V +P+++P +       
Sbjct: 156 VWKQIPFMT---LIITSAFAAIPEDIRYALRTLGASRLKTFFFVEVPLAMPGITAAILLT 212

Query: 520 FINALTTTSAVVFLYSTDTVPASVAVLNMDDAGQTGAAAAMAVMIMLSAALAKLLHVGL 578
           FI ++ + +    +      P SV ++   + G+     AM +++ L A    +L+  L
Sbjct: 213 FIGSMGSYAIPDIVGPPTARPLSVLMIQEFNQGRFNQVYAMGMILSLFAVTVLILYYSL 271