Pairwise Alignments

Query, 234 a.a., phosphonate utilization transcriptional regulator PhnR from Vibrio cholerae E7946 ATCC 55056

Subject, 265 a.a., HTH-type transcriptional repressor NagR from Xanthobacter sp. DMC5

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 47/220 (21%), Positives = 99/220 (45%), Gaps = 9/220 (4%)

Query: 3   YVKIKDAIVEQIDAGMLMPRQKLPAERKLAESFDTTRVTLREALSLLEAEGKIYREDRRG 62
           Y ++++ ++ ++  G+  P + LP+E +LA     ++ T+R+AL  + AE  + R   RG
Sbjct: 38  YRQVRETLIRRMVDGVWAPGEPLPSEIQLAAELGVSQGTVRKALDEMAAENIVVRRQGRG 97

Query: 63  WFISPAPLRYDPTQTLNFTNMALA----QNRQPKTELVSAKAVIANKQATRLLKLKPFSD 118
            F++    R+D  + L F    L     +   P++ ++  +           L L     
Sbjct: 98  TFVA----RHDEERIL-FQFFKLVGDDGERHFPESRVLGIERAKGTAAECAALALPRNGR 152

Query: 119 VYRVDRVRYLDNRPVVYVTNYIRPELFPNLLDFDLSQSLTDLYREHYATQYQTIHYRIST 178
           V R+ R+R  D  P++  +  +  ++FP L D  +  +L  LY + Y         ++  
Sbjct: 153 VLRIRRLRTFDGAPLIIESLILPDQMFPGLADAPVPNNLYGLYAQRYGITVARAREQLKA 212

Query: 179 SSLLGEMAQALRATSGTPAMVVERVNYNQKGELIDCDIEY 218
                + A  L    G P ++++R+ Y+  G  ++  + +
Sbjct: 213 VGADADTAAMLHVEPGAPVLLIDRLAYSLDGTPVEWRVSF 252