Pairwise Alignments

Query, 234 a.a., phosphonate utilization transcriptional regulator PhnR from Vibrio cholerae E7946 ATCC 55056

Subject, 236 a.a., predicted DNA-binding transcriptional regulator (NCBI) from Escherichia coli BW25113

 Score =  120 bits (301), Expect = 2e-32
 Identities = 64/221 (28%), Positives = 117/221 (52%), Gaps = 1/221 (0%)

Query: 7   KDAIVEQIDAGMLMPRQKLPAERKLAESFDTTRVTLREALSLLEAEGKIYREDRRGWFIS 66
           K+ +   +  G+  P  KLP+ER+L E     R+TLR+AL  LEAE KI+R+DR+GWF++
Sbjct: 12  KEKLDRWLKDGITTPGGKLPSERELGELLGIKRMTLRQALLNLEAESKIFRKDRKGWFVT 71

Query: 67  PAPLRYDPTQTLNFTNMALAQNRQPKTELVSA-KAVIANKQATRLLKLKPFSDVYRVDRV 125
                Y P  + +F   A+ Q R+P        +     +    L+ + P +++YR+   
Sbjct: 72  QPRFNYSPELSASFQRAAIEQGREPSWGFTEKNRTSDIPETLAPLIAVTPSTELYRITGW 131

Query: 126 RYLDNRPVVYVTNYIRPELFPNLLDFDLSQSLTDLYREHYATQYQTIHYRISTSSLLGEM 185
             L+   V Y   YI PE+ P  ++   + S + ++ + Y  +            + G++
Sbjct: 132 GALEGHKVFYHETYINPEVAPGFIEQLENHSFSAVWEKCYQKETVVKKLIFKPVRMPGDI 191

Query: 186 AQALRATSGTPAMVVERVNYNQKGELIDCDIEYWRHDAITI 226
           ++ L  ++G PA+++E+   +Q+G ++  DIEYWR +A+ +
Sbjct: 192 SKYLGGSAGMPAILIEKHRADQQGNIVQIDIEYWRFEAVDL 232