Pairwise Alignments

Query, 234 a.a., phosphonate utilization transcriptional regulator PhnR from Vibrio cholerae E7946 ATCC 55056

Subject, 243 a.a., putative DNA-binding transcriptional regulator from Escherichia coli BL21

 Score = 77.4 bits (189), Expect = 2e-19
 Identities = 49/225 (21%), Positives = 109/225 (48%), Gaps = 2/225 (0%)

Query: 3   YVKIKDAIVEQIDAGMLMPRQKLPAERKLAESFDTTRVTLREALSLLEAEGKIYREDRRG 62
           Y  ++  +++ I  G+    Q++P E +L   ++ +R+T+R+A+S L A+G + R   +G
Sbjct: 13  YATVRQRLLDDIAQGVYQAGQQIPTENELCTQYNVSRITIRKAISDLVADGVLIRWQGKG 72

Query: 63  WFISPAPLRYDPTQTLNFTNMALAQNRQPKTELVSAKAVIANKQATRLLKLKPFSDVYRV 122
            F+    +         FT+  ++Q +  K +++  + V A     + L +   S+V+ +
Sbjct: 73  TFVQSQKVENALLTVSGFTDFGVSQGKATKEKVIEQERVSAAPFCEK-LNIPGNSEVFHL 131

Query: 123 DRVRYLDNRPVVYVTNYIRPELFPNLLDFDLSQSLT-DLYREHYATQYQTIHYRISTSSL 181
            RV YLD  P+   +++I    +P+  +  +  S T  L++E + T+  +    I   + 
Sbjct: 132 CRVMYLDKEPLFIDSSWIPLSRYPDFDEIYVEGSSTYQLFQERFDTRVVSDKKTIDIFAA 191

Query: 182 LGEMAQALRATSGTPAMVVERVNYNQKGELIDCDIEYWRHDAITI 226
               A+ L+   G P   + ++ ++Q  + +     + R + IT+
Sbjct: 192 TRPQAKWLKCELGEPLFRISKIAFDQNDKPVHVSELFCRANRITL 236