Pairwise Alignments

Query, 301 a.a., multidrug transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 282 a.a., hypothetical protein from Pseudomonas simiae WCS417

 Score = 88.6 bits (218), Expect = 2e-22
 Identities = 83/307 (27%), Positives = 146/307 (47%), Gaps = 44/307 (14%)

Query: 2   SFMPIILVLFSALLHAGWNIIGKRYQSSGPSFFL------GATSATSLLLTPYIVWYFTK 55
           S + I LVL SA +HA WN + +    +G S F+      G      LL  P +     +
Sbjct: 4   SDIAITLVLISAFMHATWNAVVR----AGSSRFMTLAMVDGTALVICLLALPLVSVPSLE 59

Query: 56  IGWSTLPTQFWLLLVVSGLSQMVYMLGLAFAYSKVDIGIAYPLARGLPVLLVGAGTVMLG 115
           +G           ++VS +   VY L L  AY   D G  YP+ RG+P +LV   +  L 
Sbjct: 60  VGG---------YILVSVVLNTVYRLFLIKAYETGDFGQVYPVMRGVPPVLVALFSYFLL 110

Query: 116 YD-LQLNQWLGFALITLGCLMIPLQKFRQFRFADYANLGIVWALVAALGTAGYSIIDKEA 174
           ++ L +   +G +LI +G + +   +    R        I+ A+ A    A Y+++D + 
Sbjct: 111 HEQLSVQALVGVSLICVGIISLTFVR----RMTAQMFKPILMAVCAGAFIASYTVVDAKG 166

Query: 175 LAIIEQTVGSQMPASYSAVLYLGIQFWAMCIPLAIWYLLTGQRAPFVEA----WRIRYTA 230
           +   E  +          ++YL + F ++ IPL  +   + +R+   +A    WR+    
Sbjct: 167 VRTSETVL--------QYIVYLTV-FQSIPIPLLAF---SKERSALAQAIRGHWRV---G 211

Query: 231 TLAGLMMGGTYSLVLYAMTLTENVSFIVALRQTSIVFGLFMGIAFLGERWYVTRLLGVSA 290
            L G+    +Y+LVL+A++L + V+ + ALR+TS++ G  +   F  ER+   R+L    
Sbjct: 212 LLGGVFYLASYALVLFALSL-DAVAKVSALRETSVIIGAIIAALFFHERFGWRRMLSAFV 270

Query: 291 IVAGLVV 297
           IV+G+++
Sbjct: 271 IVSGIIL 277