Pairwise Alignments

Query, 301 a.a., multidrug transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., multidrug DMT transporter permease from Pseudomonas simiae WCS417

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 93/305 (30%), Positives = 143/305 (46%), Gaps = 40/305 (13%)

Query: 1   MSFMPIILVLFSALLHAGWNIIGKRYQSSGPSFFLGAT---SATSLLLTPYIVWYFTKIG 57
           M F  +ILVLF+ALLHA WN + +          +GA    S T + L+  +V     + 
Sbjct: 1   MPFPIVILVLFAALLHASWNALLR----------VGADRLWSMTVMCLSVALVSIGVALY 50

Query: 58  WSTLPTQFWLLLVVSGLSQMVYMLGLAFAYSKVDIGIAYPLARGL-PVLLVGAGTVMLGY 116
                   W    +SG+  + Y L L  +Y   D+G  YP+ARG  P+L+        G 
Sbjct: 51  LPAPAAASWPYAALSGVLHVGYNLFLVRSYKVGDLGQTYPIARGSSPILITLFALAFAGE 110

Query: 117 DLQLNQWLGFALITLGCLMIPLQKFRQFRFADYANLGIVWALVAALGT----AGYSIIDK 172
            L  +   G AL++ G + +    FRQ R A       V +L  ALGT    A YS+ D 
Sbjct: 111 TLSTSALFGIALVSGGIISLA---FRQRRLA-------VPSLPYALGTGFFIAAYSVTDG 160

Query: 173 EALAIIEQTVGSQMPASYSAVLYLGIQFWAMCIPLAIWYLLTGQRAPFVEAWRIRYTATL 232
               +      S  P +Y+A +      W + +PL ++  L G R+ F     +   A +
Sbjct: 161 VGARL------SGAPMAYTAWM---CALWGVLMPL-VYMGLRGARSLFAPRPGL-IPALM 209

Query: 233 AGLMMGGTYSLVLYAMTLTENVSFIVALRQTSIVFGLFMGIAFLGERWYVTRLLGVSAIV 292
            GL+    Y +V+YAM+ +   S + ALR+TS++F   +G  FLGE   V ++L  + I 
Sbjct: 210 GGLVSLLAYGIVIYAMSESPMGS-VSALRETSVLFAALIGYFFLGEALTVRKVLACAVIA 268

Query: 293 AGLVV 297
           AG ++
Sbjct: 269 AGTML 273