Pairwise Alignments

Query, 301 a.a., multidrug transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 278 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score = 89.7 bits (221), Expect = 7e-23
 Identities = 91/308 (29%), Positives = 141/308 (45%), Gaps = 45/308 (14%)

Query: 1   MSFMPIILVLFSALLHAGWNIIGKRY--QSSGPSFFLGATSATSLLLTPYIVWYFTKIGW 58
           M+F  ++LVL  A+LHAGWN + K    +S   S      +A SL   P++ +       
Sbjct: 1   MTFDILLLVLLGAVLHAGWNALVKSGSDKSLDASLIAAGAAACSLPFLPFLPF------- 53

Query: 59  STLPTQFWL-LLVVSGLSQMVYMLGLAFAYSKVDIGIAYPLARGLPVLLVGA-GTVMLGY 116
              P    +  L+ S + Q  Y   +A AY+  DIG+ YP+ RG+  L+V A  ++ L  
Sbjct: 54  ---PAPVAIPFLIASAVLQFAYFRLVAAAYTIGDIGLVYPVMRGVAPLIVAATSSLFLSE 110

Query: 117 DLQLNQWLGFALITLGCLMIPLQKFRQFRFADYANLGIVWALVAALGTAGYSIIDKEALA 176
            L      G A+I+ G L +  +  R           I+ AL+ A   A Y+ +D     
Sbjct: 111 VLSPLALAGIAVISGGILTLAFEARRG------GGKAILVALLNAFVIASYTFVDG---- 160

Query: 177 IIEQTVGSQMPAS-YSAVLYLGIQFWAMCIPLAIWYLLTGQRAPFVEA--WRIRYTATLA 233
                VG+++  +  S  L++ +    +    A +    G  A  V+   WR        
Sbjct: 161 -----VGARLSGNAISYTLWMSLLPPVLLFGFAFYQRGVGPVARHVQRNWWR-------- 207

Query: 234 GLMMGG----TYSLVLYAMTLTENVSFIVALRQTSIVFGLFMGIAFLGERWYVTRLLGVS 289
           GL+ GG    +Y L LYAMT    V+ + ALR+TSI+F L + +  L ER  + R L   
Sbjct: 208 GLIGGGGSILSYGLALYAMTKAP-VAVVAALRETSILFALVISVVILKERASIWRYLAGG 266

Query: 290 AIVAGLVV 297
            I AG++V
Sbjct: 267 IIAAGVLV 274