Pairwise Alignments

Query, 490 a.a., MFS transporter from Vibrio cholerae E7946 ATCC 55056

Subject, 516 a.a., oligopeptide:H+ symporter from Rhodanobacter sp000427505 FW510-R12

 Score =  155 bits (392), Expect = 3e-42
 Identities = 107/485 (22%), Positives = 225/485 (46%), Gaps = 27/485 (5%)

Query: 8   SMMFCQMMFGLSFYGVMVILTRFFLEDLNYSEADTMMVVGAFSSIGPLFAIAGGFIADKF 67
           ++   +M     FYG+ V++  + ++ L + ++   ++ GA +++       GG++ DK 
Sbjct: 16  TVFLIEMWERFGFYGMQVLMVTYMVKKLGFVDSKANLIWGAAAALIYATPAIGGWVGDKL 75

Query: 68  LGAYRSLAISYVTFAIGYALLVLGASSTHVPLSLVGIALASYARGLMSPSYPSLYKRTFA 127
           +G  R++ +  +   +GY +L +  ++ +     +G+ +     G   P+  +L ++ + 
Sbjct: 76  IGTRRTMLLGAMVLTLGYVMLWIPTNNAYFLYIALGVIIVG--NGFFKPNAGNLVRKIYE 133

Query: 128 SEED-FNNGYPVNYSVNNVGALLGQYLFPMLVLLLG--------FHGSFALSALMATLAT 178
            ++   ++ + + Y   N+G+ +   L P +   +G        +H +F + A+      
Sbjct: 134 GDDTKIDSAFTIYYMAVNIGSTISMLLTPWIRDYVGAKYGDAWGWHTAFGVCAVGLVFGL 193

Query: 179 ITLVVMRRPLIEVASEKDQQSVSMGNWIAFTLLSLAMVGLVFFMFSNMVIGQNIVYAIGL 238
           +   +M R L  + S  D + V +       L ++ MV +  F+  +  + +  VYA G+
Sbjct: 194 VNYTLMHRTLAHIGSPADDKPVDVKRLGTVLLAAIGMVFVSAFILQDQTVAKWCVYAAGV 253

Query: 239 AAIVYFINLMLKARRAEALKMGTILIVTVLTTCFFVYYGQMMTSMTMVTIN--TMRGELF 296
             +  F++L+  + + E   +   L++TV T  FF++Y QM TS+ +       +  +LF
Sbjct: 254 VILGIFVHLIRSSEQHERAGLVAALVLTVQTIFFFIFYQQMSTSLNLFAQRNVALSFDLF 313

Query: 297 G--IIPIAPEASMAMNPLWCIVAGPVISYLFPTLEKRGITFSTATKIAFAFVLTAISFGI 354
           G  +    PE   ++N LW ++  PV+ +++ T+ K G   S A K A+ F   AI F I
Sbjct: 314 GLHLFNWIPEQFQSLNALWIVLLSPVLVFIYNTMGKVGKNPSVAAKFAWGFAAVAIGFFI 373

Query: 355 ----LTFAVSTVGEEAIIRPEVFLVIHFFQAFAEVVVGSLVVAFILSVAPKQIENFSVSL 410
                 FAV+       +   + L  +   +  E++V  L +A I    P ++  F +  
Sbjct: 374 YGVGARFAVN-----GQVSSWIMLWGYGLYSLGELLVSGLGLAMIARYVPARMGGFMMGA 428

Query: 411 FYIAMALSGIIGAVFSTSIALEKGQVVTQQIVQI-IYGDYFKLLTVLAVVMVGVALLASV 469
           +Y+A  LS  +G+V +   ++     +T  +V + +Y   F  L    V    +AL    
Sbjct: 429 YYVASGLSQYLGSVVANFASIPTD--ITDPLVSLPVYTSLFNKLGFAGVACTVIALAMLP 486

Query: 470 LIRKM 474
           L++K+
Sbjct: 487 LMKKL 491