Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  463 bits (1191), Expect = e-134
 Identities = 249/576 (43%), Positives = 337/576 (58%), Gaps = 13/576 (2%)

Query: 40  GEAKYPENFTHFDYVNPQAPKYGKVTFGELGTYDNFNRFASRGVAAANTAELYDPLMFSP 99
           GE  YP  F HF YVNP APK G +   E GT+D FN    RG  AA    +YD LM   
Sbjct: 57  GEPAYPPGFPHFKYVNPNAPKGGLLRLAEDGTFDTFNFVVPRGTPAAGINLIYDTLMVPA 116

Query: 100 ADEIDSYYPLIASKIRYSDDFTWLEIDLNPNARFHDGKPITAQDVEFSFEKFMAEGVPQY 159
           +DE+ S Y LIA  + Y  DF+ +   +  +AR+HDGKPIT +DV FSFE  + +  P  
Sbjct: 117 SDEVASEYGLIAEGVSYPADFSSVTYRIRADARWHDGKPITPEDVVFSFEA-LTKNNPNQ 175

Query: 160 RVYYQDVKSVKAIAERTVRIEMKQPNREQLFSLAQSTRVLPKHYW-------QYKNLAEP 212
           R YY  V   +   +R V     Q    +L  +     +LPKH+W       + +++A+ 
Sbjct: 176 RFYYSHVTKAEKTGDRDVTFTFDQAGNRELPQIVGQLTILPKHWWTGTDANGKPRDIAQG 235

Query: 213 LNEPPVGSGAYQIVDFKPGQSVTYKLNPDYWAKDLPVNVGRNNFAQIQYDYYRDDTVMLE 272
             E P+GSGAY++  F  G+S+TY+   DYWAKDL VNVG++NF +++Y+Y+RDDTVMLE
Sbjct: 236 SLEVPLGSGAYRVKSFIAGRSITYERVKDYWAKDLNVNVGKDNFDEMRYEYFRDDTVMLE 295

Query: 273 AFKAGEFDLREENQAKFWATSYTGRNFDQGLIKKEEIAHQAPASTQGFIFNTQRPVFQDV 332
           AFKA ++D R E+ AK WAT+Y       G +  E   +++    Q FI N +R  F+D 
Sbjct: 296 AFKADQYDFRVESSAKNWATAYDFPARADGRVVLEMFENRSSGVMQAFIPNLRRDKFKDP 355

Query: 333 RVREALNYALDFEWMNKNLFYDQYQRTRSYFQNTEYEAQGLPNAAELAVLTPYKEQLPAR 392
           RVR ALNYALDFE MN  LF+ QY+RT S+F  TE  + GLP   EL +L   K+++P +
Sbjct: 356 RVRRALNYALDFEGMNHTLFFGQYKRTNSFFSGTELASSGLPQGRELEILNSVKDKVPPQ 415

Query: 393 VFTETYQPSVTDGSGRIRTQMREAFALLKEAGWELKNKVMTNVKTGEPLSFELLIYSPTT 452
           VFT  Y    +      R  +REA  L KEAG+E+KN+ + N K GEP + E L+ SP  
Sbjct: 416 VFTTAYTNPESGSEEARRANLREAARLFKEAGYEVKNRKLVNAK-GEPFTIEFLLSSPAM 474

Query: 453 ERIAIPLQKNLQLMGIEMKIRTVDTTQYTKRLRDRDFDMISHGFSANPYPSPNLLIVWNS 512
           ER+A+  +  L+ +GIE+ IR VDT+QY  R+R RD+D+I  G+  +  P       W S
Sbjct: 475 ERVAVFYRPALERLGIEVSIRMVDTSQYINRVRSRDYDIIVSGWGQSLSPGNEQREFWGS 534

Query: 513 NY--MDSSYNSAGANHPVIDALTEQIAKSQQDTEKLRALGSALDRVLQWNFYIIPQWHLS 570
                D S N AG   P +DAL E++  +  D   L A   ALDRVL WN Y+IP W L+
Sbjct: 535 EAADRDGSRNLAGIKDPAVDALIEKVIYA-SDRADLVAATHALDRVLLWNEYVIPAWGLN 593

Query: 571 MYRVAMWDKFSRPSVLPKYSLGL-DTWWIDQEKAAR 605
             R A WD+F+ P+ LP YS    D WW D  KA++
Sbjct: 594 YTRTARWDRFAHPAQLPTYSFAFPDIWWFDPAKASK 629