Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., ABC transporter, substrate-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score = 77.8 bits (190), Expect = 1e-18
 Identities = 103/437 (23%), Positives = 178/437 (40%), Gaps = 55/437 (12%)

Query: 108 PLIASKIRYSDDFTWLEIDLNPNARFHDGKPITAQDVEFSFEKFMAEGVPQYRVYYQDVK 167
           PL+A+    S D      +L    ++HDGK  T+ DV FS    + +  P+ R  + +V 
Sbjct: 80  PLLATAWSQSKDGLQYTFELRKGVKWHDGKDFTSADVAFSILT-LKQVHPRGRGTFANVV 138

Query: 168 SVKAIAERTVRIEMKQPNREQLFSLAQS-TRVLPKHYWQYKNLAE-PLNEPPVGSGAYQI 225
            VK     T  I + +P+   L +LA + + ++PKH ++  ++A    N  PVG+G +  
Sbjct: 139 DVKTPDANTAVIVLSKPSPFLLTALASTESPIVPKHLYEGTDIASNKYNSAPVGTGPFVF 198

Query: 226 VDFKPGQSVTYKLNPDYWAKDLPVNVGRNNFAQIQYDYYRDDTVMLEAFKAGEFDLREEN 285
            ++  G  +  + NP+YW K  P         ++   +  D      A ++G  DL   N
Sbjct: 199 KEWVQGSHIILERNPNYWDKPKPY------LDRVVVRFVLDSAARAAALESGAADL--AN 250

Query: 286 QAKFWATSYTGRNFDQGLIKKEEIAHQAPASTQGFIFNTQRPVFQDVRVREALNYALDFE 345
                  S   R      ++ +        S Q   FN   P  Q + VR A+  A+D  
Sbjct: 251 GTGGIPLSDVERFGKLPGVQIDTRISPYLGSHQQIYFNLDTPALQKLEVRRAIAQAIDVN 310

Query: 346 WMNKNLFYDQYQRTRSYFQNTEYEAQGLPNAAELAVLTPYKEQLPARVFTETYQPSVTDG 405
              K ++Y     + S         +G+    + A + PY            + P     
Sbjct: 311 AFAKTVWYGYGTLSASPI------GKGISRYHD-ASIQPY-----------PFNP----- 347

Query: 406 SGRIRTQMREAFALLKEAGWELKNKVMTNVKTGEPLSFELLIYSPTTERIAIP-LQKNLQ 464
                   +EA A L  AG++ +    T +K         ++Y+P  ER A   ++++L 
Sbjct: 348 --------KEAEAALDAAGFK-RGAGGTRLKL-------RVLYNPFQERRAADFVRQSLG 391

Query: 465 LMGIEMKIRTVDTTQY-TKRLRDRDFDMISHGFSANPYPSPNL-LIVWNSNYMDS--SYN 520
            +GI+  + + D   Y TK   DR FD+     +    P+  +  + W+ N+       N
Sbjct: 392 RIGIDATVESYDFATYVTKAYTDRAFDITLESLTNLFDPTVGVQRVFWSKNFKVGLPFSN 451

Query: 521 SAGANHPVIDALTEQIA 537
           +A   +P +D L E  A
Sbjct: 452 AAHYVNPEVDRLLEAAA 468