Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 524 a.a., nickel ABC transporter periplasmic binding protein from Pseudomonas putida KT2440

 Score = 93.6 bits (231), Expect = 2e-23
 Identities = 110/419 (26%), Positives = 170/419 (40%), Gaps = 62/419 (14%)

Query: 89  AELYDPLM-FSPADEIDSYYPLIASKIRYSDDFTWLEIDLNPNARFHDGKPITAQDVEFS 147
           A +Y+PL+ ++ A  ++   P +A   + SDD       L    RF DG P  A   + +
Sbjct: 61  AMVYEPLVRYTAAGTLE---PWLAEAWQVSDDGKTYTFTLRDGVRFSDGTPFDAPAAKAN 117

Query: 148 FEKFMAEGVP-QYRVYYQDVKSVKAIAERTVRIEMKQPNREQLFSLAQSTRVLPKHYWQY 206
            +  +A     ++      +  V+A    T+R+ +K P    L  LAQ   V P  +   
Sbjct: 118 LDAVLANTQRHRWMELVTTLDHVEAPERLTLRLVLKHPYYPTLMELAQ---VRPLRF--- 171

Query: 207 KNLAEPLNEP--PVGSGAYQIVDFKPGQSVTYKLNPDYWAKDLPVNVGRNNFAQIQYDYY 264
              A P  +P  P G+G +   + + G+   +  NP YW         +  + ++     
Sbjct: 172 ---ASPQAKPGQPAGTGPWMRAESRLGEYDRFVRNPQYWGP-------KPAYGEVMVKVI 221

Query: 265 RDDTVMLEAFKAGEFDLREENQAKFWATSYTGRNFDQGLIKKEEIAHQAPASTQGFIFNT 324
            D      A +AGE +L +    +  A ++  R  DQG       A  AP +T+    NT
Sbjct: 222 PDPNSRALALQAGEVELIQGAAGEITAGTFV-RLRDQGYAT----ALSAPLATRTLAMNT 276

Query: 325 QRPVFQDVRVREALNYALDFEWMNKNLFYDQYQRTRSYFQNTEYEAQGLPNAAELAVLTP 384
            R   +D+ VR+A+N A+D + +   + Y    R  + F      A  +P A     L P
Sbjct: 277 GRGATRDLAVRQAINEAVDKQAIIDKILYGLEPRADTLF------ASNMPYAD--IGLKP 328

Query: 385 YKEQLPARVFTETYQPSVTDGSGRIRTQMREAFALLKEAGWELKNKVMTNVKTGEPLSFE 444
           Y            Y P+            R A A L  AGW L        K GEPL+ E
Sbjct: 329 Y-----------PYDPA------------RAAHA-LDAAGWTLAPGASVRSKGGEPLAIE 364

Query: 445 LLIY--SPTTERIAIPLQKNLQLMGIEMKIRTVDTTQYTKRLRDRDFDMISHGFSANPY 501
           L+    S   + +A  LQ  L  +GI + +R V+     +R RD DF MI       PY
Sbjct: 365 LVFLGTSALQKSLAEVLQGELAKIGIHIDLRAVEEGALVRRQRDGDFGMIFADTWGAPY 423