Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., ABC transporter substrate-binding protein from Serratia liquefaciens MT49

 Score =  610 bits (1573), Expect = e-179
 Identities = 301/595 (50%), Positives = 396/595 (66%), Gaps = 2/595 (0%)

Query: 17  VTLALSSQFSWAAVIETTRLVGFGEAKYPENFTHFDYVNPQAPKYGKVTFGELGTYDNFN 76
           V  ALS       + E+      GE KY  +F+H+DYVNP APK G V    +GTYDNFN
Sbjct: 10  VLSALSFGLQAETLNESYAFAQLGEPKYSTDFSHYDYVNPAAPKGGDVRLAAIGTYDNFN 69

Query: 77  RFASRGVAAANTAELYDPLMFSPADEIDSYYPLIASKIRYSDDFTWLEIDLNPNARFHDG 136
           R+A RGV    T  LYD L  +  DEI SYYPLIA   R+  D  W+EID+N  ARFHD 
Sbjct: 70  RYAPRGVPGERTDALYDSLFTTSDDEIGSYYPLIAESARFPADMRWVEIDINARARFHDS 129

Query: 137 KPITAQDVEFSFEKFMAEGVPQYRVYYQDVKSVKAIAERTVRIEMKQPNREQLFSLAQST 196
            PITA DV F+F KFM EGVPQ+RV Y+ + +VKAI+  TVRIE  QP++++L  L  S 
Sbjct: 130 TPITAADVAFTFNKFMTEGVPQFRVAYKGI-TVKAISRLTVRIEFPQPDKDKLLGLF-SL 187

Query: 197 RVLPKHYWQYKNLAEPLNEPPVGSGAYQIVDFKPGQSVTYKLNPDYWAKDLPVNVGRNNF 256
            +LP+ +W+   L EPL+ PP+ SG Y+I  ++ GQ +TY+   DYWA +LPVN GR NF
Sbjct: 188 PILPQSFWKDHKLNEPLSTPPLSSGPYKIASYRLGQYITYQRVRDYWAANLPVNRGRFNF 247

Query: 257 AQIQYDYYRDDTVMLEAFKAGEFDLREENQAKFWATSYTGRNFDQGLIKKEEIAHQAPAS 316
             I+YDYY DD V LEAFKAG +D R E   K WAT Y G NF +  I K++  +Q+  +
Sbjct: 248 DSIRYDYYLDDKVALEAFKAGAYDFRIEGSPKNWATQYQGGNFARNYIIKQDETNQSAQN 307

Query: 317 TQGFIFNTQRPVFQDVRVREALNYALDFEWMNKNLFYDQYQRTRSYFQNTEYEAQGLPNA 376
           T+   FN +RP+F D +VREA+  A DF+WMNK L+Y+ YQRT SYFQNT Y A G P+A
Sbjct: 308 TRWMAFNMRRPLFADPKVREAITLAFDFDWMNKALYYNAYQRTNSYFQNTPYAASGYPDA 367

Query: 377 AELAVLTPYKEQLPARVFTETYQPSVTDGSGRIRTQMREAFALLKEAGWELKNKVMTNVK 436
           AELA+L P K ++PA VFT  YQP  +DGSG  R  + +A  LL +AGWE+KN+ + N K
Sbjct: 368 AELALLAPLKGKVPAEVFTSIYQPPSSDGSGNDRQNLLKATQLLNQAGWEVKNQRLVNSK 427

Query: 437 TGEPLSFELLIYSPTTERIAIPLQKNLQLMGIEMKIRTVDTTQYTKRLRDRDFDMISHGF 496
           TG+P SFEL++ S +  +  +P Q NL+ +GI+M+IR +D +Q+TKR+RD DFDM+   +
Sbjct: 428 TGQPFSFELMLLSGSNFQYVLPFQHNLKRLGIDMQIREIDISQFTKRMRDGDFDMMPTVY 487

Query: 497 SANPYPSPNLLIVWNSNYMDSSYNSAGANHPVIDALTEQIAKSQQDTEKLRALGSALDRV 556
            A P+PS +L  +W+S Y++SS+N+ G   P +D+L  QIA  Q D + L  LG ALDRV
Sbjct: 488 LAMPFPSSSLETLWDSKYINSSWNTPGVTDPAVDSLVRQIAAHQGDEKALLPLGRALDRV 547

Query: 557 LQWNFYIIPQWHLSMYRVAMWDKFSRPSVLPKYSLGLDTWWIDQEKAARLPEKRR 611
           L WN Y++P W+ +  R A WDKFS P V P Y +G D WW D  KAARLP +++
Sbjct: 548 LTWNRYMLPMWYSNHDRYAYWDKFSTPPVRPAYVIGFDNWWFDVNKAARLPTQQQ 602