Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 602 a.a., extracellular solute-binding protein from Erwinia tracheiphila SCR3

 Score =  582 bits (1500), Expect = e-170
 Identities = 288/580 (49%), Positives = 376/580 (64%), Gaps = 2/580 (0%)

Query: 32  ETTRLVGFGEAKYPENFTHFDYVNPQAPKYGKVTFGELGTYDNFNRFASRGVAAANTAEL 91
           E+      GE +Y  +FTH++YVNP APK G V    +GTYDNFNRFA RG  A  +  L
Sbjct: 25  ESYAFAQLGEPRYATDFTHYEYVNPSAPKGGNVVLSAIGTYDNFNRFALRGNPAVGSDTL 84

Query: 92  YDPLMFSPADEIDSYYPLIASKIRYSDDFTWLEIDLNPNARFHDGKPITAQDVEFSFEKF 151
           YD L  SP DE  SYYPLIA   RY D F W+EI L P ARF DG P+TA+D  F+F KF
Sbjct: 85  YDTLFVSPDDEAGSYYPLIAEVARYPDSFRWVEITLKPQARFQDGTPMTAEDAAFTFNKF 144

Query: 152 MAEGVPQYRVYYQDVKSVKAIAERTVRIEMKQPNREQLFSLAQSTRVLPKHYWQYKNLAE 211
           M EGVPQ+RV ++ V + +AI+  TVR E+   +R ++ SL  S  V P+ +W+   L+E
Sbjct: 145 MTEGVPQFRVVFKGV-TARAISRLTVRFELPGRDRNKMLSLL-SLPVFPEKFWKDHKLSE 202

Query: 212 PLNEPPVGSGAYQIVDFKPGQSVTYKLNPDYWAKDLPVNVGRNNFAQIQYDYYRDDTVML 271
           PL  PP+ SG YQI  +KPGQSVTY    DYWA DLPVN G +NF  I+YDYY DD V  
Sbjct: 203 PLAVPPLASGPYQITRYKPGQSVTYSRVKDYWAADLPVNKGLHNFDTIRYDYYLDDNVAF 262

Query: 272 EAFKAGEFDLREENQAKFWATSYTGRNFDQGLIKKEEIAHQAPASTQGFIFNTQRPVFQD 331
           EAFKAG FD R E  AK W T Y G+NF +  I K E  ++    T    FN  +P+F D
Sbjct: 263 EAFKAGAFDFRAEGSAKKWVTQYQGKNFKKQQIIKSEQPNKIATVTNWLAFNVPKPLFSD 322

Query: 332 VRVREALNYALDFEWMNKNLFYDQYQRTRSYFQNTEYEAQGLPNAAELAVLTPYKEQLPA 391
            RVREA++   DFEWMNK LFY  Y RT SYFQNT+Y A+  P+A EL +LTP+K ++P 
Sbjct: 323 RRVREAISLVFDFEWMNKALFYGAYNRTSSYFQNTDYAARHYPDAKELEILTPFKGKIPD 382

Query: 392 RVFTETYQPSVTDGSGRIRTQMREAFALLKEAGWELKNKVMTNVKTGEPLSFELLIYSPT 451
            VF++ YQPS TDGSG  R  + +A  LL++AGW++KN+ + N+K G P  FELL  S  
Sbjct: 383 DVFSKIYQPSHTDGSGYDRNNLLKALDLLQQAGWQIKNQRLVNIKNGIPFRFELLTRSGG 442

Query: 452 TERIAIPLQKNLQLMGIEMKIRTVDTTQYTKRLRDRDFDMISHGFSANPYPSPNLLIVWN 511
            ++  +P Q NL  +GI++ IR VD++QY  R+R  DFDM+   + A P+P   L I W 
Sbjct: 443 NDQWILPFQHNLARIGIQLTIRQVDSSQYLARMRKSDFDMLMSPYPAMPFPDSGLQIYWA 502

Query: 512 SNYMDSSYNSAGANHPVIDALTEQIAKSQQDTEKLRALGSALDRVLQWNFYIIPQWHLSM 571
           + Y++SSYN    ++PVID L +QI + Q D   L  LG +LDRVL W++Y+IP W+ + 
Sbjct: 503 TPYINSSYNLPHVSNPVIDNLVDQINQHQGDKAALLPLGRSLDRVLLWDYYMIPMWYNAS 562

Query: 572 YRVAMWDKFSRPSVLPKYSLGLDTWWIDQEKAARLPEKRR 611
            R A W+KFS P + P +S+G D+WW D  KAA+L  +R+
Sbjct: 563 DRYAWWNKFSMPEIRPTWSVGFDSWWYDANKAAQLSTQRQ 602