Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 603 a.a., ABC transporter substrate-binding protein from Dickeya dianthicola ME23

 Score =  620 bits (1600), Expect = 0.0
 Identities = 305/600 (50%), Positives = 395/600 (65%), Gaps = 7/600 (1%)

Query: 17  VTLALSSQFSWAAVIETTR-----LVGFGEAKYPENFTHFDYVNPQAPKYGKVTFGELGT 71
           +   L S  +W A  E T          GE KYP+ FTH+ Y NP APK GK T   LGT
Sbjct: 6   IIATLLSACAWLADAEPTAQQTYAFATLGEPKYPQGFTHYGYTNPSAPKGGKATLSALGT 65

Query: 72  YDNFNRFASRGVAAANTAELYDPLMFSPADEIDSYYPLIASKIRYSDDFTWLEIDLNPNA 131
           +DNFNRFA RG+AAA T  LYD L  S  DE  SYYPLIA   RY+ D++W+++++NP A
Sbjct: 66  FDNFNRFALRGLAAARTESLYDALYVSSEDEPASYYPLIALTARYASDYSWIDVEMNPAA 125

Query: 132 RFHDGKPITAQDVEFSFEKFMAEGVPQYRVYYQDVKSVKAIAERTVRIEMKQPNREQLFS 191
           RFHDG PITA DV F+F  FM +GVPQ+R+YY+  + VKA+   TVR     P++E++  
Sbjct: 126 RFHDGSPITAADVAFTFNMFMTQGVPQFRLYYKGAE-VKAMTPHTVRFTFPDPDKEKMLG 184

Query: 192 LAQSTRVLPKHYWQYKNLAEPLNEPPVGSGAYQIVDFKPGQSVTYKLNPDYWAKDLPVNV 251
           +  +  V+P+ +W    L++PLN+PP+ SG Y+I D++ GQ V Y    DYWA DLPVN 
Sbjct: 185 ML-TLPVMPEKFWHDHKLSDPLNKPPLASGPYRITDYRMGQYVIYSRVADYWAADLPVNR 243

Query: 252 GRNNFAQIQYDYYRDDTVMLEAFKAGEFDLREENQAKFWATSYTGRNFDQGLIKKEEIAH 311
           GR NF Q++YDYY DD+V LEAFKAG FDLR E   K WAT Y G NF +G I+K++  +
Sbjct: 244 GRYNFDQLRYDYYLDDSVALEAFKAGAFDLRIEGSPKHWATQYEGGNFARGYIRKKDETN 303

Query: 312 QAPASTQGFIFNTQRPVFQDVRVREALNYALDFEWMNKNLFYDQYQRTRSYFQNTEYEAQ 371
           QA   T+  +FN QRP F D RVR+AL  A DF WMNK LF++ YQR  S+FQNTEY AQ
Sbjct: 304 QAAQDTRWLVFNIQRPQFSDRRVRQALALAFDFNWMNKTLFFNSYQRPSSFFQNTEYAAQ 363

Query: 372 GLPNAAELAVLTPYKEQLPARVFTETYQPSVTDGSGRIRTQMREAFALLKEAGWELKNKV 431
           G+P+A ELA LTP K+++PA VF   Y+P  +D SG  RT +  A  LL++AGWELKN+V
Sbjct: 364 GMPSAEELAWLTPLKDKIPADVFGPAYRPESSDASGYDRTGLLNALQLLQQAGWELKNQV 423

Query: 432 MTNVKTGEPLSFELLIYSPTTERIAIPLQKNLQLMGIEMKIRTVDTTQYTKRLRDRDFDM 491
           + N +TG+P  FELL+ S       +P Q +L  +GI M++R+VD+ Q+  R R RDFDM
Sbjct: 424 LVNKQTGQPFRFELLLPSAANSIYVLPFQHSLARLGIRMEVRSVDSPQFNNRFRKRDFDM 483

Query: 492 ISHGFSANPYPSPNLLIVWNSNYMDSSYNSAGANHPVIDALTEQIAKSQQDTEKLRALGS 551
           I   + A PYPS +L I W+S Y++SSYNS G     ID L + I + Q D   L +LG 
Sbjct: 484 IPKLYPAMPYPSSDLAISWSSGYINSSYNSPGVQDAAIDQLIDNIIRHQGDKPALLSLGP 543

Query: 552 ALDRVLQWNFYIIPQWHLSMYRVAMWDKFSRPSVLPKYSLGLDTWWIDQEKAARLPEKRR 611
           ALDRVL WN + IP W  +  R A W+KF+ P+  P Y+LG+D+WW D EKAA LP  RR
Sbjct: 544 ALDRVLTWNQFAIPMWFSNHDRFAYWNKFAMPATRPAYTLGIDSWWYDAEKAATLPAARR 603