Pairwise Alignments

Query, 611 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 623 a.a., hypothetical protein from Azospirillum sp. SherDot2

 Score =  515 bits (1326), Expect = e-150
 Identities = 266/575 (46%), Positives = 345/575 (60%), Gaps = 5/575 (0%)

Query: 40  GEAKYPENFTHFDYVNPQAPKYGKVTFGELGTYDNFNRFASRGVAAANTAELYDPLMFSP 99
           G+ KY  +F H DY NP APK G+V     G +DN N F  RG AAA    ++  L  S 
Sbjct: 47  GKPKYGPDFQHLDYANPDAPKGGEVKLMAFGGFDNLNPFILRGQAAAGAGLVFQTLTTSN 106

Query: 100 ADEIDSYYPLIASKIRYSDDFTWLEIDLNPNARFHDGKPITAQDVEFSFEKFMAEGVPQY 159
            DE  + Y L+A  I  + D TW+   L P ARFHDG+P+TA DV +SF+    +G P Y
Sbjct: 107 GDEAITEYGLLAESIEIAPDRTWVAFTLRPEARFHDGQPVTADDVIWSFDTLKEKGHPLY 166

Query: 160 RVYYQDVKSVKAIAERTVRIEMKQPNREQLFSLAQSTRVLPKHYWQYKNLAEPLNEPPVG 219
           R YY DV   +   ERTV+   +  N  +L  +     VLPKH +  ++ A    +P +G
Sbjct: 167 RTYYADVTKAEKTGERTVKFSFRDGNNPELPVIMGQLPVLPKHAFANRDFATTTLDPLIG 226

Query: 220 SGAYQIVDFKPGQSVTYKLNPDYWAKDLPVNVGRNNFAQIQYDYYRDDTVMLEAFKAGEF 279
           SG Y++V+ + G+++TY+   D+WAKDLP+N GR NF +I+YDYYRD  V  EAFKAG +
Sbjct: 227 SGPYKVVEVQAGRAITYERVKDWWAKDLPINRGRYNFDRIRYDYYRDLDVAFEAFKAGAY 286

Query: 280 DLREENQAKFWATSYTGRNFDQGLIKKEEIAHQAPASTQGFIFNTQRPVFQDVRVREALN 339
           D R EN +K W T Y       G I KEEI H+ P   Q F+FN +RPVFQD RVREALN
Sbjct: 287 DFRLENSSKNWTTGYNVPAVQNGQIIKEEIKHEDPQGMQAFVFNIRRPVFQDRRVREALN 346

Query: 340 YALDFEWMNKNLFYDQYQRTRSYFQNTEYEAQGLPNAAELAVLTPYKEQLPARVFTETYQ 399
           Y  D+EW   NL Y  YQRTRSYF NTE  + GLP+  EL +L P++ Q+P  VFT+ Y+
Sbjct: 347 YLFDYEWTRANLSYGLYQRTRSYFANTELASTGLPSPEELKLLEPFRGQIPDEVFTKPYE 406

Query: 400 PSVTDGSGRIRTQMREAFALLKEAGWELKNKVMTNVKTGEPLSFELLIYSPTTERIAIPL 459
           P  TD SG IR  +R A  LLK+AGW+LKN  + N + G+P  FE L+     ERI  P 
Sbjct: 407 PPKTDASGNIRGNLRTALGLLKDAGWDLKNGKLVNAQ-GQPFRFEFLLVQADMERIVQPF 465

Query: 460 QKNLQLMGIEMKIRTVDTTQYTKRLRDRDFDMISHGFSANPYPSPNLLIVWNSNYMD--S 517
            +NL+  GIE +IR VD+ QY  R  + D+DMI   F  +  P       W S+  D   
Sbjct: 466 VRNLERAGIEAQIRVVDSAQYQNRTDNFDYDMIIERFPQSLSPGNEQRDYWESSRADQPG 525

Query: 518 SYNSAGANHPVIDALTEQIAKSQQDTEKLRALGSALDRVLQWNFYIIPQWHLSMYRVAMW 577
           S NS G  +P ID L E +  +  D   L A   ALDRVL WN+Y+IP WH ++YRVA W
Sbjct: 526 SRNSIGIKNPAIDKLVETLI-AAPDRPALIAATRALDRVLLWNWYVIPHWHDTVYRVAYW 584

Query: 578 DKFSRPSVLPKYSLGL-DTWWIDQEKAARLPEKRR 611
           ++FS P+V PKY LG  D+WWID +K A+L    R
Sbjct: 585 NRFSHPAVAPKYGLGFPDSWWIDADKNAKLANSAR 619