Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 358 a.a., microcin ABC transporter permease from Pseudomonas simiae WCS417

 Score =  480 bits (1236), Expect = e-140
 Identities = 231/360 (64%), Positives = 290/360 (80%), Gaps = 4/360 (1%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           ML+YI RRLLL++PTL+ I+ INF IIQ APGGPVEQ IA+LEG   G   R  GGG EV
Sbjct: 1   MLAYIFRRLLLIIPTLFGILLINFVIIQAAPGGPVEQMIAKLEG-FEGATSRIAGGGAEV 59

Query: 61  AAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGD 120
           +    A  S Y+G++GLDP +++EI + +GFDK   ER + M+K+YA  +FG+S FR   
Sbjct: 60  SV---AGSSSYRGAQGLDPALIKEIEKMYGFDKSAPERLWIMVKNYAQLDFGDSFFRDAK 116

Query: 121 VIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFL 180
           VIDLI E++PVSISLGLWSTL++YL+SIPLGI+KA  HGS FDVW+S+ +I+GYAIP FL
Sbjct: 117 VIDLIKEKMPVSISLGLWSTLIMYLVSIPLGIAKATRHGSHFDVWTSSAIIVGYAIPAFL 176

Query: 181 FAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGFATLS 240
           FAI+LI++FA G+Y  WFPLRGL S+NF  L W  ++LDYFWHL LP  A+VIG FAT++
Sbjct: 177 FAILLIVVFAGGSYLDWFPLRGLTSNNFDELSWGGKILDYFWHLALPITALVIGNFATMT 236

Query: 241 MLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFFTGSML 300
           +LTKNSFLDEINKQYVVTA+AKGL   R+LY H+FRNAML++IAGFPSAFI IFFTGS+L
Sbjct: 237 LLTKNSFLDEINKQYVVTAKAKGLTNHRVLYGHIFRNAMLLVIAGFPSAFIGIFFTGSLL 296

Query: 301 IEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRIDFEAR 360
           +EV+FSL+G+GL+ FEA I RDYP+VF +L+I TLLGL++ +I DLTY  VDPRIDF +R
Sbjct: 297 VEVIFSLDGLGLMSFEAAINRDYPVVFGTLFIFTLLGLIVKLIGDLTYTLVDPRIDFASR 356