Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 353 a.a., peptide ABC transporter permease from Pseudomonas simiae WCS417

 Score =  449 bits (1155), Expect = e-131
 Identities = 214/360 (59%), Positives = 277/360 (76%), Gaps = 9/360 (2%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           M +YI+RRLLL++PTL  I+ +NF I+Q APGGPVEQAIA L+G          GGG   
Sbjct: 1   MFAYIVRRLLLIIPTLVIILLVNFVIVQAAPGGPVEQAIAHLQG---------IGGGAVG 51

Query: 61  AAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGD 120
            +  +    G + SRGLDP+++ +I +++GFDKP  ER + MLK YA  +FG S FRG  
Sbjct: 52  GSSGEGISGGSRASRGLDPKLIADIEKQYGFDKPAPERLWLMLKSYAQLDFGNSFFRGKT 111

Query: 121 VIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFL 180
           VIDLI+E++PV++SLGLW+TL+ YL+SIPLGI KA+ HGS FDVWSS  ++IGYA+P FL
Sbjct: 112 VIDLILEKMPVTLSLGLWATLITYLVSIPLGIRKAVRHGSSFDVWSSTAIVIGYAMPAFL 171

Query: 181 FAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGFATLS 240
           FA+ LI++FA G   +WFP+RGLVS+NF  L    ++ DYFWHL LP  ++VIGGFATL+
Sbjct: 172 FAMFLIVVFAGGTSLNWFPVRGLVSENFEELSTVGKIADYFWHLVLPVTSLVIGGFATLT 231

Query: 241 MLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFFTGSML 300
           +LTKNSFL+EI +QYVVTARAKGL ERR+LY HVFRNAML++I+G P AFI++FF GS+L
Sbjct: 232 ILTKNSFLNEITRQYVVTARAKGLSERRVLYGHVFRNAMLLVISGIPQAFIAVFFAGSLL 291

Query: 301 IEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRIDFEAR 360
           IEV+FSL+G+G + +EA + RDYP+VF SL+I TL GLL+ +I DL Y  VDPRIDF AR
Sbjct: 292 IEVIFSLDGLGRMSYEAAVSRDYPVVFGSLFIFTLFGLLIKLIGDLCYTLVDPRIDFAAR 351