Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 334 a.a., ABC transporter permease subunit from Variovorax sp. OAS795

 Score =  158 bits (399), Expect = 2e-43
 Identities = 100/368 (27%), Positives = 180/368 (48%), Gaps = 49/368 (13%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           ML ++L R+ L+VPT   +  + FF+I++ PG P+E                        
Sbjct: 1   MLRFLLTRVSLLVPTFIGMTLLAFFLIRMVPGDPIETMA--------------------- 39

Query: 61  AAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGD 120
                       G RG+DP    ++   +GFDKP+  +Y   +      + G+SL     
Sbjct: 40  ------------GERGIDPARHAQLRTAYGFDKPVIVQYGIYIGRVLHGDLGKSLITQES 87

Query: 121 VIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFL 180
           V +  +   P ++ LG+ + L   L+ +P GI  A+   S FD    A  + GY++P F 
Sbjct: 88  VANEFLALFPATVELGVCAILFALLLGLPAGIIAAVRRNSIFDHGVMATSLTGYSMPIFW 147

Query: 181 FAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVL---------DYFW----HLTLP 227
           + ++LI+ F+      W P+ G ++  +   P    +L         D FW    HL LP
Sbjct: 148 WGLLLILFFSV--QLGWTPVSGRIAVQYFVEPRTGFLLVDALRAGEVDAFWSALHHLVLP 205

Query: 228 TLAMVIGGFATLSMLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFP 287
            + +     A ++ +T+++ L+ + + Y+ TARAKGL   R++  H  RNA++ ++    
Sbjct: 206 AIVLGTVPLAVIARMTRSAMLEVLGEDYIRTARAKGLSRLRVVGLHALRNALIPVVTVI- 264

Query: 288 SAFISIFFTGSMLIEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLT 347
              + + FTG++L E +FS  G+G    EA  +RDYP++   + ++  + +L++++ D+T
Sbjct: 265 GLQVGVLFTGAILTETIFSWPGVGKWLIEAIGRRDYPVLQGGMLLLGGIVMLVNLLVDVT 324

Query: 348 YMWVDPRI 355
           Y  ++PRI
Sbjct: 325 YGIINPRI 332