Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 367 a.a., microcin C ABC transporter permease YejB from Magnetospirillum magneticum AMB-1

 Score =  454 bits (1167), Expect = e-132
 Identities = 219/365 (60%), Positives = 276/365 (75%), Gaps = 5/365 (1%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGG--- 57
           M++Y LRRLLL+  TL+ I+ INF ++Q APGGPVE  I +L+GN      R +G     
Sbjct: 1   MIAYTLRRLLLIPLTLFGIMVINFTVVQFAPGGPVELMITKLQGNAVDAAARVSGSASGE 60

Query: 58  --QEVAAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESL 115
             Q    P       Y+G++GL P  ++EI R+FGFD+P HER++ M+  YA F+FG+S 
Sbjct: 61  TTQAKPPPGQGGQGAYRGAQGLSPDFIKEIERQFGFDRPAHERFWLMMVQYARFDFGKSF 120

Query: 116 FRGGDVIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYA 175
           +R   V+ L++E++P SISLGLWSTL+IYL+SIPLGI+KA   GSR DV SS  VIIGYA
Sbjct: 121 YRDTSVVGLVIEKMPTSISLGLWSTLIIYLVSIPLGIAKATRDGSRLDVVSSWAVIIGYA 180

Query: 176 IPGFLFAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGG 235
           +PGFLFAI LI+LFA G YF+WFPLRGL S       +  + LDYFWHL LP  A+V+GG
Sbjct: 181 VPGFLFAIALIVLFAGGQYFAWFPLRGLSSPGMEGASFATRALDYFWHLALPVTALVVGG 240

Query: 236 FATLSMLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFF 295
           FA L+MLTKNSFL+EINKQYVVTARAKGL ERRILY H+FRNAML+I+AGFP A + I F
Sbjct: 241 FAGLTMLTKNSFLEEINKQYVVTARAKGLSERRILYGHIFRNAMLLIVAGFPRALVGILF 300

Query: 296 TGSMLIEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRI 355
           TGS+L+E++FSL+GIGLLGFEA   RDYP++F +LY  +LLGL+L+++SDLTY WVDPRI
Sbjct: 301 TGSVLVEIIFSLDGIGLLGFEAVSNRDYPVMFGTLYAFSLLGLVLNLVSDLTYHWVDPRI 360

Query: 356 DFEAR 360
           DFE R
Sbjct: 361 DFEGR 365