Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 365 a.a., microcin C ABC transporter permease YejB from Dickeya dianthicola ME23

 Score =  520 bits (1340), Expect = e-152
 Identities = 252/364 (69%), Positives = 303/364 (83%), Gaps = 4/364 (1%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLE-GNTSGVMERFTGGGQE 59
           M +Y+LRRLLLV+PTLWAIITINFFI+QIAPGGPV+QAIA +E G  SG      GGG  
Sbjct: 1   MGTYLLRRLLLVIPTLWAIITINFFIVQIAPGGPVDQAIASIEMGQGSGFSAGGDGGGGL 60

Query: 60  VAAPTDAPVS---GYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLF 116
              P     S    Y+G+RGLDP+++ EIT+R+GFDKP+HERYF+++ DY  F+FG SLF
Sbjct: 61  ARGPGGGKPSVENTYRGARGLDPEIIAEITKRYGFDKPLHERYFKLIWDYVRFDFGNSLF 120

Query: 117 RGGDVIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAI 176
           RG  VI LI E +PVSISLGLWSTL+IYL+SIPLGI KA+ +GS FDVWSS ++I+GYAI
Sbjct: 121 RGSSVIALIKESMPVSISLGLWSTLIIYLVSIPLGIKKAVRNGSAFDVWSSTLIIVGYAI 180

Query: 177 PGFLFAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGF 236
           P FLFAI+LI+LFA G Y  WFPLRGLVS +F  L W+ +V DY WH+ LP LAMVIGGF
Sbjct: 181 PAFLFAILLIVLFAGGGYLDWFPLRGLVSPHFDILSWFDKVTDYLWHIALPVLAMVIGGF 240

Query: 237 ATLSMLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFFT 296
           ATL+MLTKNSFLDEI KQYVVTARAKGLDE+RILY+HVFRNAML++IAGFP+ FIS+FFT
Sbjct: 241 ATLTMLTKNSFLDEIRKQYVVTARAKGLDEKRILYRHVFRNAMLLVIAGFPATFISMFFT 300

Query: 297 GSMLIEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRID 356
           GS+LIEVMFSL G+GLLG++AT+QRDYP++F +LYI TL+GLLL+I+SD+TY  VDPRID
Sbjct: 301 GSLLIEVMFSLNGLGLLGYDATLQRDYPVMFGTLYIFTLIGLLLNILSDMTYTLVDPRID 360

Query: 357 FEAR 360
           FE R
Sbjct: 361 FEER 364