Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 335 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  155 bits (391), Expect = 2e-42
 Identities = 101/368 (27%), Positives = 177/368 (48%), Gaps = 49/368 (13%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           M+ +I  +LL +VPT   I  + F  +++ PG PV                         
Sbjct: 1   MIRFIFGKLLYLVPTFLGITIVAFAFVRVLPGDPVLLMA--------------------- 39

Query: 61  AAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGD 120
                       G RG+ P+   ++  + GF +PI E+Y   L      + G SL     
Sbjct: 40  ------------GERGISPERHAQLAEQLGFAQPIWEQYLHFLGRLLQGDLGNSLVTKKP 87

Query: 121 VIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFL 180
           V+   +   P ++ LGL + ++  +I +P+G+  AI  GS FD  S    ++G+++P F 
Sbjct: 88  VLTEFLALFPATVELGLVAIIIATVIGVPVGVIAAIRRGSWFDQISMTTALVGFSMPIFW 147

Query: 181 FAIILIILFASGNYFSWFPLRGLVS--DNFASLPWYQQV-----------LDYFWHLTLP 227
           + ++LII+F+      W P+ G +S    F S+  +  +                HL LP
Sbjct: 148 WGLLLIIMFS--GILQWTPVSGRISLMYFFPSVTGFMLIDSLISGQKGAFASALSHLILP 205

Query: 228 TLAMVIGGFATLSMLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFP 287
           ++ +     A ++  T+++ L+ + + YV TARAKG+   R++  H  RNAM+ +I    
Sbjct: 206 SVVLATIPLAVIARQTRSAMLEVLGEDYVRTARAKGMSASRVVGIHALRNAMIPVITTI- 264

Query: 288 SAFISIFFTGSMLIEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLT 347
              I +   G++L E +FS  GIG    ++  +RDYP+V S L ++  L ++++++ DLT
Sbjct: 265 GLQIGVLMAGAILTETIFSWPGIGKWMIDSISRRDYPVVQSGLLLIAGLVMVVNLLVDLT 324

Query: 348 YMWVDPRI 355
           Y  ++PRI
Sbjct: 325 YGLINPRI 332