Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  140 bits (352), Expect = 6e-38
 Identities = 91/348 (26%), Positives = 170/348 (48%), Gaps = 48/348 (13%)

Query: 12  VVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEVAAPTDAPVSGY 71
           ++  ++ ++TI F I+++ PG P    +                 G +  A         
Sbjct: 1   MIVVMFLVVTIVFVILRVTPGDPAAVML-----------------GPDATA--------- 34

Query: 72  KGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGDVIDLIVERLPV 131
                   Q + E+  R G D+ +  +Y   +      + G+S+F    V   +++R   
Sbjct: 35  --------QDIAELRTRLGLDQSLGVQYVYYIGQLLKGDLGQSIFLNMPVGSALLDRAEP 86

Query: 132 SISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFLFAIILIILFAS 191
           +  L ++S L+  +I++P+GI  A   GS  D  ++ + ++  +IP F   +IL+  FA 
Sbjct: 87  TFFLTIFSLLIAGVIALPIGIYAAYRRGSFVDQAATTIAMLAASIPSFWLGLILMQFFAV 146

Query: 192 GNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGFATLSMLTKNSFLDEI 251
                 FP+ G      +        L+  +HLTLP +A+ +   A +   T+ S LD +
Sbjct: 147 R--LDLFPVSGYGGPGAS-------FLERMYHLTLPAIALGLVSSALILRFTRASMLDVL 197

Query: 252 NKQYVVTARAKGLDERRILYKHVFRNAM--LIIIAGFPSAFISIFFTGSMLIEVMFSLEG 309
              YV TARAKG+ ERR++ KH  +NA+  ++ + G  +A   +  +G+++ E +F L G
Sbjct: 198 GDDYVRTARAKGVKERRVVMKHALKNALIPILTVLGLTAA---VLISGAVVTETVFGLPG 254

Query: 310 IGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRIDF 357
           +G L   A ++RDYP++  +L ++  L +L++   D+ Y+ VDPR+ +
Sbjct: 255 VGNLVVSAVLRRDYPVIQGALLVIAGLYVLINFAIDMLYLLVDPRVRY 302