Pairwise Alignments

Query, 360 a.a., peptide ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 355 a.a., Inner membrane ABC transporter permease protein YejB from Acinetobacter radioresistens SK82

 Score =  414 bits (1064), Expect = e-120
 Identities = 197/360 (54%), Positives = 270/360 (75%), Gaps = 8/360 (2%)

Query: 1   MLSYILRRLLLVVPTLWAIITINFFIIQIAPGGPVEQAIAQLEGNTSGVMERFTGGGQEV 60
           M +YIL+RLLL++PTL+ I+ INF +IQ+APGGPVEQAI Q +         F G G   
Sbjct: 1   MGTYILKRLLLIIPTLFLILLINFMVIQLAPGGPVEQAIQQAQN--------FQGVGNTS 52

Query: 61  AAPTDAPVSGYKGSRGLDPQVVEEITRRFGFDKPIHERYFQMLKDYATFNFGESLFRGGD 120
            A T    S Y+G+RGL  ++VE+I  ++GFDK   ER++ MLK Y T +FG S F+   
Sbjct: 53  HAETVGHSSEYQGARGLSDEMVEKIKAQYGFDKSAPERFWIMLKGYLTLDFGISFFKDKP 112

Query: 121 VIDLIVERLPVSISLGLWSTLLIYLISIPLGISKAIHHGSRFDVWSSAVVIIGYAIPGFL 180
           V  L+ E++PV++SLGLWSTLLIYL+SIPLGI KA  HG+ FD  +S ++ +GYA+P F+
Sbjct: 113 VTQLLWEKMPVTVSLGLWSTLLIYLVSIPLGIKKARQHGTLFDKSTSLLLAVGYAVPTFV 172

Query: 181 FAIILIILFASGNYFSWFPLRGLVSDNFASLPWYQQVLDYFWHLTLPTLAMVIGGFATLS 240
           F ++LI+ FA G+YF WFPL+GLVS+NF  L    ++ DYFWH+ LP   M++GGFA L+
Sbjct: 173 FGVLLIVFFAGGSYFQWFPLQGLVSENFQELSLLGKIKDYFWHMALPLFTMILGGFAGLT 232

Query: 241 MLTKNSFLDEINKQYVVTARAKGLDERRILYKHVFRNAMLIIIAGFPSAFISIFFTGSML 300
            LTK SF++E++KQYV+ ARAKGL E R+LY HVFRNAMLI+IAG P A I IFF G++ 
Sbjct: 233 YLTKYSFMEELSKQYVLAARAKGLSENRVLYGHVFRNAMLIVIAGLPEALIGIFFVGNLF 292

Query: 301 IEVMFSLEGIGLLGFEATIQRDYPLVFSSLYIMTLLGLLLSIISDLTYMWVDPRIDFEAR 360
           IE++F+L+G+GL+GFEA +QRDYP++F +L++ TLLGL+L +ISD+ Y  +DPRI+F++R
Sbjct: 293 IEIIFNLDGLGLMGFEAIVQRDYPVIFGTLFLFTLLGLILRLISDVLYQIIDPRINFDSR 352