Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 402 a.a., Inner membrane ABC transporter permease protein YejE from Xanthobacter sp. DMC5

 Score =  449 bits (1155), Expect = e-131
 Identities = 214/357 (59%), Positives = 275/357 (77%), Gaps = 24/357 (6%)

Query: 13  NPLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYS 72
           +PL   R A F+ N RG+WS  +F++LFV+SL AE IANDKP+L+ YDG +Y P+ + Y 
Sbjct: 41  SPLNRRRLANFRGNGRGYWSFVVFMVLFVLSLGAEFIANDKPILVSYDGGYYFPVFRAYP 100

Query: 73  ETQFGGEFDTEADYTDPYVVSLIEEKGQ-IIWPLIRFHYDTINFDITGSVPSAPD----- 126
           ET FGG+F+T+ADY DP++  LI EKG  ++WP IRF Y T N D+    PS P      
Sbjct: 101 ETAFGGDFETDADYRDPFLQKLIAEKGGWMVWPFIRFSYSTHNLDLPTPAPSPPTWMLTE 160

Query: 127 ------------------SVNWLGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVL 168
                              +NWLGTDD+GRDV+AR+IYGFRISVLFG  LT++SS++GV 
Sbjct: 161 AQCKAAAEKKGVSGCAGLEMNWLGTDDQGRDVVARLIYGFRISVLFGLALTIVSSVVGVG 220

Query: 169 IGATQGYYGGWLDLFGQRFIEVWSGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVG 228
            GA QGY+GGW+DL  QRFIE+W+ +P+L+LL+I+SS + P FW LLGI++LFSW+SLVG
Sbjct: 221 AGAVQGYFGGWVDLLFQRFIEIWTAIPSLYLLLIISSVLVPGFWVLLGILLLFSWVSLVG 280

Query: 229 VVRAEFLRCRNFDYVRAAQAMGVSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLD 288
           +VRAEFLR RNF+YV+AA+A+GV ++ I+ RHMLPNAMVA+LTM+PFILS SV TLT+LD
Sbjct: 281 LVRAEFLRARNFEYVQAARALGVGNLTIMTRHMLPNAMVATLTMLPFILSSSVMTLTALD 340

Query: 289 FLGFGLPAGSPSLGELLAQGKANLQAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           FLGFGLP GSPSLGELL+QGK N+QAPWLG++ F  ++VML+LL+F+GEAVRDAFDP
Sbjct: 341 FLGFGLPPGSPSLGELLSQGKNNIQAPWLGLTGFFTVAVMLSLLIFVGEAVRDAFDP 397