Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  485 bits (1249), Expect = e-142
 Identities = 227/334 (67%), Positives = 281/334 (84%), Gaps = 1/334 (0%)

Query: 13  NPLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYS 72
           +PL   R+ RFKAN+RG+WSLW+FL LFV+SL AELIANDKPL + YDG WY P ++RY 
Sbjct: 4   SPLNRRRFERFKANKRGWWSLWLFLSLFVLSLGAELIANDKPLAVHYDGGWYFPALKRYP 63

Query: 73  ETQFGGEFDTEADYTDPYVVSLIEEKGQ-IIWPLIRFHYDTINFDITGSVPSAPDSVNWL 131
           ET FGGEF  EA+Y  PY+  L++ K    +W  I F Y +IN+D+    P+ P SVNWL
Sbjct: 64  ETTFGGEFPLEANYKSPYIQELLKAKDAWTLWAPIPFSYQSINYDLKVPAPAPPSSVNWL 123

Query: 132 GTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVW 191
           GTDD+GRDVLAR+IYGFR+SVLF   LTV+SS+IGV+ GA QG+YGGW+DL GQRF+E+W
Sbjct: 124 GTDDQGRDVLARVIYGFRVSVLFALTLTVLSSIIGVIAGALQGFYGGWVDLAGQRFLEIW 183

Query: 192 SGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGV 251
           SG+P L+LLIIL+SFV+PNFWWLLGIM+LFSWMSLV VVRAEFLR RN +YVRAA+A+G+
Sbjct: 184 SGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALGM 243

Query: 252 SDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKAN 311
            +  I+ RH+LPNAMV+++T MPFIL+G++ TLT+LDFLGFGLPAGSPSLGEL+AQGK+N
Sbjct: 244 QNGAIMFRHILPNAMVSTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKSN 303

Query: 312 LQAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           LQAPWLG+SAF VL++ML+LLVFIGE+ RDAFDP
Sbjct: 304 LQAPWLGMSAFAVLAIMLSLLVFIGESARDAFDP 337