Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 339 a.a., putative inner membrane ABC transporter permease protein from Pseudomonas putida KT2440

 Score =  479 bits (1234), Expect = e-140
 Identities = 224/334 (67%), Positives = 280/334 (83%), Gaps = 1/334 (0%)

Query: 13  NPLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYS 72
           +PL   R+ RFKANRRG+WSLW+FL+LF +SL AELIANDKP+ ++YDG WY P  +RY 
Sbjct: 4   SPLNRRRFERFKANRRGWWSLWLFLILFGLSLGAELIANDKPIAVRYDGQWYFPAFKRYP 63

Query: 73  ETQFGGEFDTEADYTDPYVVSLIEEKGQ-IIWPLIRFHYDTINFDITGSVPSAPDSVNWL 131
           ET FGGEF  EA+Y  PY+  L+ +K   ++W  I F Y +IN+D+    P+ P + NWL
Sbjct: 64  ETTFGGEFPLEANYKSPYIRELLAKKDSFVLWAPIPFSYQSINYDLRVPAPAPPSADNWL 123

Query: 132 GTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVW 191
           GTDD+GRDVLAR+IYGFRISVLF   LTV SS++GV+ GA QG+YGGW+DL GQRF+E+W
Sbjct: 124 GTDDQGRDVLARVIYGFRISVLFALTLTVASSIVGVIAGALQGFYGGWVDLAGQRFLEIW 183

Query: 192 SGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGV 251
           SG+P L+LLIIL+SFV+PNFWWLLGIM+LFSWMSLV VVRAEFLR RN +YVRAA+A+G+
Sbjct: 184 SGLPVLYLLIILASFVQPNFWWLLGIMLLFSWMSLVDVVRAEFLRGRNLEYVRAARALGM 243

Query: 252 SDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKAN 311
            +  I+ RH+LPNAM++++T MPFIL+G++ TLT+LDFLGFGLPAGSPSLGEL+AQGK+N
Sbjct: 244 RNGAIMYRHILPNAMISTMTFMPFILTGAIGTLTALDFLGFGLPAGSPSLGELVAQGKSN 303

Query: 312 LQAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           LQAPWLGISAF VL++ML+LLVFIGE+ RDAFDP
Sbjct: 304 LQAPWLGISAFAVLALMLSLLVFIGESARDAFDP 337