Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., putative ABC transporter permease protein from Pseudomonas putida KT2440

 Score =  426 bits (1094), Expect = e-124
 Identities = 204/334 (61%), Positives = 268/334 (80%), Gaps = 1/334 (0%)

Query: 13  NPLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYS 72
           +PL+  R  RF+ +R G+ SLW+F  L ++SL AEL+ANDKPLL+ Y G  Y+P ++RY+
Sbjct: 3   SPLSRRRLQRFRRHRLGWVSLWLFAGLLLLSLCAELVANDKPLLLGYKGNVYVPALKRYT 62

Query: 73  ETQFGGEFDTEADYTDPYVVSLIEEKGQ-IIWPLIRFHYDTINFDITGSVPSAPDSVNWL 131
           E QFGG+   + DY   YV  LI E+G  +++  I F  DT N+D+    PS P + NWL
Sbjct: 63  EQQFGGQLPFQPDYRSAYVRQLIAEQGGWMLFAPIPFSADTPNYDLQVPTPSPPSASNWL 122

Query: 132 GTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVW 191
           GTDD+GRDVLAR++YG R+S+LF F LTV+S LIGV  GA QGY+GGW+DLFGQR +EVW
Sbjct: 123 GTDDQGRDVLARVLYGTRVSLLFAFALTVVSVLIGVAAGALQGYHGGWVDLFGQRLLEVW 182

Query: 192 SGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGV 251
           SG+P L+LLIILS FVEP+FWWLLGIM LFSW++LV VVRAEFLR RN +YV+AA+A+G+
Sbjct: 183 SGLPVLYLLIILSGFVEPDFWWLLGIMALFSWLTLVDVVRAEFLRGRNLEYVKAARALGL 242

Query: 252 SDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKAN 311
            D +++LRH+LPNAM A+LT +PF+L+G++TTLT+LDFLGFG+PAGS SLGEL+ QGK +
Sbjct: 243 PDSQVMLRHILPNAMNATLTYVPFMLTGAITTLTALDFLGFGMPAGSASLGELVTQGKQH 302

Query: 312 LQAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           L+APWLG +AF  L+V+L+LLVFIG+A+R+AFDP
Sbjct: 303 LEAPWLGFTAFFALAVILSLLVFIGDALREAFDP 336