Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 341 a.a., Oligopeptide transport system permease protein OppC (TC 3.A.1.5.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  488 bits (1256), Expect = e-143
 Identities = 231/333 (69%), Positives = 277/333 (83%)

Query: 13  NPLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYS 72
           +P+ +ARWARF+ NRRG+WSLWIFL++F +SL AELIANDKPLL++Y+G WY P+V+ YS
Sbjct: 5   SPVNQARWARFRHNRRGYWSLWIFLVVFSLSLCAELIANDKPLLVRYEGQWYFPLVKNYS 64

Query: 73  ETQFGGEFDTEADYTDPYVVSLIEEKGQIIWPLIRFHYDTINFDITGSVPSAPDSVNWLG 132
           E  FGG   T ADY DP++   +E +G ++W  +RF  +TINF  T   PS P + NWLG
Sbjct: 65  ERDFGGPLATTADYQDPWLQRQLENRGWVLWAPVRFSANTINFATTQPFPSPPSAKNWLG 124

Query: 133 TDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVWS 192
           TD  G DV ARI+YG RIS+LFG +LT+ SS++GVL GA QGYYGG +DL+GQR IEVWS
Sbjct: 125 TDANGGDVFARILYGTRISILFGLMLTICSSVMGVLAGALQGYYGGKVDLWGQRLIEVWS 184

Query: 193 GMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGVS 252
           GMPTLFL+I+LSS V+PNFWWLL I VLF WMSLVGVVRAEFLR RNFDY+RAAQA+GVS
Sbjct: 185 GMPTLFLIILLSSVVQPNFWWLLAITVLFGWMSLVGVVRAEFLRTRNFDYIRAAQALGVS 244

Query: 253 DMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKANL 312
           D  IILRHMLPNAMVA+LT +PFIL  S+TTLTSLDFLGFGLP GSPSLGELL QGK NL
Sbjct: 245 DRDIILRHMLPNAMVATLTFLPFILCSSITTLTSLDFLGFGLPLGSPSLGELLLQGKNNL 304

Query: 313 QAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           QAPWLGI+AF+ ++++L+LL+FIGEAVRDAFDP
Sbjct: 305 QAPWLGIAAFLSVAILLSLLIFIGEAVRDAFDP 337