Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 338 a.a., microcin C ABC transporter permease from Erwinia tracheiphila SCR3

 Score =  476 bits (1224), Expect = e-139
 Identities = 230/333 (69%), Positives = 273/333 (81%)

Query: 13  NPLTEARWARFKANRRGFWSLWIFLLLFVVSLFAELIANDKPLLIQYDGAWYMPIVQRYS 72
           NP+ +ARWARF  NRRG+WSLWIF ++FV+ L AEL+ANDKPLL+ Y G    P++  YS
Sbjct: 2   NPVNQARWARFCHNRRGYWSLWIFAVIFVLCLGAELLANDKPLLVSYQGQIRFPLLINYS 61

Query: 73  ETQFGGEFDTEADYTDPYVVSLIEEKGQIIWPLIRFHYDTINFDITGSVPSAPDSVNWLG 132
           E+ FGG   + ADY DP++ S IE++G  IW  +RF   TINF  T   PSAP   NWLG
Sbjct: 62  ESDFGGPLTSAADYQDPWLKSRIEQQGWAIWAPVRFGDGTINFTSTVPFPSAPSVHNWLG 121

Query: 133 TDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFGQRFIEVWS 192
           TD  G DVLAR++YG RIS+LFG +LT+ISS IGV++GA QGYYGG LDL+GQR IEVWS
Sbjct: 122 TDANGGDVLARLLYGTRISLLFGLMLTLISSAIGVVVGACQGYYGGRLDLWGQRLIEVWS 181

Query: 193 GMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVRAAQAMGVS 252
           GMPTLFL+I+LSS ++P FWWLL I VLF WM LVGVVRAEFLR RNFDY+RAAQA+GVS
Sbjct: 182 GMPTLFLIILLSSVIQPGFWWLLAITVLFGWMQLVGVVRAEFLRARNFDYIRAAQALGVS 241

Query: 253 DMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGELLAQGKANL 312
           D +I+LRHMLPNAMVA+LT +PFIL GS+TTLTSLDFLGFGLP GSPSLGELL QGK NL
Sbjct: 242 DGKIMLRHMLPNAMVATLTYLPFILCGSITTLTSLDFLGFGLPLGSPSLGELLLQGKNNL 301

Query: 313 QAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           QAPWLGI+AF+ L+++L+LL+FIGEAVRDAFDP
Sbjct: 302 QAPWLGITAFLTLAIVLSLLIFIGEAVRDAFDP 334