Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., ABC-type dipeptide/oligopeptide/nickel transport systems, permease components from Enterobacter asburiae PDN3

 Score =  153 bits (386), Expect = 6e-42
 Identities = 76/228 (33%), Positives = 137/228 (60%), Gaps = 5/228 (2%)

Query: 125 PDSVNWLGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFG 184
           PD+ +W GTD+ GRD   R +YG +IS++ GF+  + S+LIG ++G   GY+GGWLD   
Sbjct: 54  PDAAHWFGTDEYGRDYFTRALYGGQISLMVGFLAMLFSTLIGTVVGTVSGYFGGWLDNLM 113

Query: 185 QRFIEVWSGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVR 244
            R +++   +P  FLL++++++++P    ++ I+ L +WM++  +VRAE L  +  +YV 
Sbjct: 114 MRAVDILMAIPAFFLLLVVNAYLKPGVDNIILIISLLTWMNMSRLVRAETLSVKEREYVL 173

Query: 245 AAQAMGVSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGEL 304
            A+A G   +RII RH++P  +   +      ++ ++   ++L FLG G+ A + S G +
Sbjct: 174 YARASGEHPLRIIARHIIPGVLPTIIVAATLNIASAILMESTLSFLGLGVQAPAASWGSM 233

Query: 305 LAQGKANL-QAPWLGISAFVVLSVMLTLLVF--IGEAVRDAFDPHLQR 349
           L   ++ + +A WL +  F  + ++LT+  F  +G+  R AF+P   R
Sbjct: 234 LNNAQSYIGEASWLAM--FPGILILLTVFSFNVLGDVFRTAFEPGANR 279