Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., ABC transporter permease from Dickeya dianthicola ME23

 Score =  149 bits (377), Expect = 7e-41
 Identities = 83/228 (36%), Positives = 132/228 (57%), Gaps = 5/228 (2%)

Query: 125 PDSVNWLGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGWLDLFG 184
           PD  +W GTD+ GRD   R +YG +IS+L G +  V S+LIG L+G   GY GG LD   
Sbjct: 54  PDGAHWFGTDEYGRDYFTRALYGGQISLLVGVLAMVFSTLIGTLVGTVSGYVGGRLDTVL 113

Query: 185 QRFIEVWSGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRNFDYVR 244
            R +++   +P  FLL++L+++++P    ++ I+   +WMSL  +VRAE L  +  +YV 
Sbjct: 114 MRAVDMLMSIPAFFLLLVLNAYLKPGVANIILIISALTWMSLSRLVRAETLSLKEREYVL 173

Query: 245 AAQAMGVSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSPSLGEL 304
            A+A G     IILRH++PN +   +      ++ ++   ++L FLG G+     S G +
Sbjct: 174 YARASGERAWCIILRHIIPNILPTIMVAATLNIASAILMESTLSFLGLGVQQPDASWGSM 233

Query: 305 LAQGKANL-QAPWLGISAFVVLSVMLTLLVF--IGEAVRDAFDPHLQR 349
           L   +A +  A WL +  F  L ++LT+L F  +G+  R AF+P +QR
Sbjct: 234 LNNAQAYIGDATWLAL--FPGLLILLTVLSFNVLGDVFRTAFEPGVQR 279