Pairwise Alignments

Query, 352 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 268 a.a., dipeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  144 bits (364), Expect = 2e-39
 Identities = 76/227 (33%), Positives = 129/227 (56%), Gaps = 1/227 (0%)

Query: 120 SVPSAPDSVNWLGTDDKGRDVLARIIYGFRISVLFGFILTVISSLIGVLIGATQGYYGGW 179
           ++  AP + +WLGTDD GRD+L+R+IYG R S++ G +  +I+ +IGV  G   GY+GGW
Sbjct: 39  AIRKAPSAAHWLGTDDLGRDILSRMIYGARASLMAGVVSVMIAVVIGVPFGLIAGYFGGW 98

Query: 180 LDLFGQRFIEVWSGMPTLFLLIILSSFVEPNFWWLLGIMVLFSWMSLVGVVRAEFLRCRN 239
           +D+   R  E    MP L + I L++F+ P+    +  + L +    V + R + L  + 
Sbjct: 99  VDMVISRITEALLAMPFLIMAIALAAFLGPSLTNAMIAIGLSAMPIFVRLTRGQVLAVKM 158

Query: 240 FDYVRAAQAMGVSDMRIILRHMLPNAMVASLTMMPFILSGSVTTLTSLDFLGFGLPAGSP 299
            DYV  A+++G++ + I+ R++LPN     +      ++ ++    SL FLG G  A +P
Sbjct: 159 EDYVEGARSIGLNHIDIMTRYILPNVFAPIIVQATLTVATAIIAEASLSFLGLGQQAPAP 218

Query: 300 SLGELLAQGKANL-QAPWLGISAFVVLSVMLTLLVFIGEAVRDAFDP 345
           S G +L   K  L QAPW+ +   + + +++     +G+ +RDA DP
Sbjct: 219 SWGSMLNTAKNFLSQAPWMTLWPGIAIFLVVIGFNLLGDGLRDALDP 265