Pairwise Alignments
Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 544 a.a., putative ABC transporter ATP-binding protein YejF from Xanthobacter sp. DMC5
Score = 583 bits (1504), Expect = e-171
Identities = 301/523 (57%), Positives = 388/523 (74%), Gaps = 3/523 (0%)
Query: 5 VLKIDNLSVGFGIAGQARPV--TEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKG 62
+L + +LSV F A P + VS +A+GETLALVGESGSGKSVTA ++L+LLP
Sbjct: 5 LLSVRDLSVAFRRGDGAPPALAVKTVSFELAKGETLALVGESGSGKSVTALSVLKLLPYP 64
Query: 63 SAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIH 122
SA + SG I F D L SER LRGIRG I M+FQEPM SLNPLH I +Q+ E L +H
Sbjct: 65 SASHPSGEILFKGRDLLTVSERELRGIRGNNITMVFQEPMSSLNPLHTIERQVGEMLILH 124
Query: 123 RGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADE 182
RG+ A AA + +E L +VGI PE +++AYPH+LSGG+RQRVMIAMAL NEP+LLIADE
Sbjct: 125 RGMSAHAARARTLELLAEVGIPQPEERLSAYPHQLSGGQRQRVMIAMALANEPDLLIADE 184
Query: 183 PTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACH 242
PTTALDV+VQAQIL LLK LQ LGMAMLFITHDL IVR+IADRV VMQ G++VE
Sbjct: 185 PTTALDVTVQAQILKLLKELQARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVEQGGAE 244
Query: 243 TLFAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAV 302
F P HPYTQ L+ A+P+ P P A DAP +++A L+V+FPIK G R+T ++KAV
Sbjct: 245 ETFQHPRHPYTQALLKAEPKPDPAPIAPDAPLVMEANDLKVYFPIKRGILRKTVGHVKAV 304
Query: 303 TDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRS 362
+S + +G++LG+VGESGSGK+T G+A+L+L++S G I F G+ + AL + M P RS
Sbjct: 305 DGVSIAIRRGETLGVVGESGSGKTTLGLALLRLISSAGPIAFLGKPIDALSFKAMRPLRS 364
Query: 363 KMQVVFQDPYSALNPRMSVAQVIGEGLRVHS-QLNDDEIDHAICAVMQEVGLDVDTRHRY 421
+Q+VFQDP+ AL+PRMSVA+++GEGL VH QL+ DE D + A + +VGLD +TRHRY
Sbjct: 365 DLQIVFQDPFGALSPRMSVAEIVGEGLLVHQRQLSADERDARVVAALADVGLDPETRHRY 424
Query: 422 PNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFI 481
P+EFSGGQRQRI+IARA+ L+P F++LDEPTS+LD VQAQ++DLL+ LQ+K LT++FI
Sbjct: 425 PHEFSGGQRQRISIARAMALEPSFVVLDEPTSALDMIVQAQIVDLLRALQKKRDLTFMFI 484
Query: 482 SHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQL 524
SHDL V+ AL +VM+ G++VE G +FE+P YT+ L
Sbjct: 485 SHDLRVVSALASRILVMRNGKMVEEGPAHDVFEHPKEDYTRAL 527
Score = 188 bits (478), Expect = 4e-52
Identities = 102/235 (43%), Positives = 149/235 (63%), Gaps = 9/235 (3%)
Query: 301 AVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLA------SQGAIRFAGQDLQALKR 354
AV +SF LAKG++L LVGESGSGKS T +++LKLL G I F G+DL +
Sbjct: 26 AVKTVSFELAKGETLALVGESGSGKSVTALSVLKLLPYPSASHPSGEILFKGRDLLTVSE 85
Query: 355 REMLPYR-SKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGL 413
RE+ R + + +VFQ+P S+LNP ++ + +GE L +H ++ ++ EVG+
Sbjct: 86 RELRGIRGNNITMVFQEPMSSLNPLHTIERQVGEMLILHRGMSAHAARARTLELLAEVGI 145
Query: 414 DVDTRH--RYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQ 471
YP++ SGGQRQR+ IA AL +P+ ++ DEPT++LD TVQAQ+L LLK+LQ
Sbjct: 146 PQPEERLSAYPHQLSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILKLLKELQ 205
Query: 472 QKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVR 526
+ + LFI+HDL ++R + VM+ GEIVE G + F++P HPYTQ L++
Sbjct: 206 ARLGMAMLFITHDLGIVRKIADRVCVMQKGEIVEQGGAEETFQHPRHPYTQALLK 260
Score = 166 bits (421), Expect = 2e-45
Identities = 103/264 (39%), Positives = 158/264 (59%), Gaps = 19/264 (7%)
Query: 5 VLKIDNLSVGFGI--------AGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAIL 56
V++ ++L V F I G + V +GVS+ I RGETL +VGESGSGK+ A+L
Sbjct: 277 VMEANDLKVYFPIKRGILRKTVGHVKAV-DGVSIAIRRGETLGVVGESGSGKTTLGLALL 335
Query: 57 RLLPKGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLV 116
RL+ G +D L S +A+R +R + ++FQ+P +L+P + + +
Sbjct: 336 RLISSAGPIAFLGK----PIDAL--SFKAMRPLRSD-LQIVFQDPFGALSPRMSVAEIVG 388
Query: 117 ETLAIH-RGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEP 175
E L +H R L A + + + L VG+ PE + + YPHE SGG+RQR+ IA A+ EP
Sbjct: 389 EGLLVHQRQLSADERDARVVAALADVGL-DPETR-HRYPHEFSGGQRQRISIARAMALEP 446
Query: 176 ELLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQL 235
++ DEPT+ALD+ VQAQI+DLL++LQ++ + +FI+HDL +V +A R+ VM++G++
Sbjct: 447 SFVVLDEPTSALDMIVQAQIVDLLRALQKKRDLTFMFISHDLRVVSALASRILVMRNGKM 506
Query: 236 VETNACHTLFAAPAHPYTQQLINA 259
VE H +F P YT+ L A
Sbjct: 507 VEEGPAHDVFEHPKEDYTRALFAA 530