Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 523 a.a., microcin ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  555 bits (1429), Expect = e-162
 Identities = 293/521 (56%), Positives = 392/521 (75%), Gaps = 7/521 (1%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           +++I +LSV F  +GQ   V   +SL +  GE LALVGESGSGKSVTA++IL+LLP+   
Sbjct: 3   LIEIRDLSVAF--SGQT--VVRNLSLDVRPGECLALVGESGSGKSVTAHSILQLLPEAGT 58

Query: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
              +GSI +   + +  S   L+ +RG RI MIFQEPM SLNPLH I KQ+ ETL +H+G
Sbjct: 59  E-TTGSIQYRGQELIGASAATLQKLRGNRIAMIFQEPMTSLNPLHSIEKQIGETLLLHKG 117

Query: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184
           L   AA+ + +E L  VGI+ P+ ++ AYPH+LSGG+RQRVMIAMAL  EPELLIADEPT
Sbjct: 118 LGGKAAQARILELLDLVGIQKPQERLKAYPHQLSGGQRQRVMIAMALACEPELLIADEPT 177

Query: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244
           TALDV+VQ +IL LLKSLQ+ LGM++L I+HDL++VR IA RV VM++G++VE   C TL
Sbjct: 178 TALDVTVQRKILLLLKSLQKRLGMSLLLISHDLNLVRSIAQRVCVMRAGEIVEQADCQTL 237

Query: 245 FAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTD 304
           F AP HPY++ L++A+P    +  + +  T+LQ + L V F + GG FRR + Y++AV  
Sbjct: 238 FNAPQHPYSRLLLDAEPDADAL-CSDERETVLQVDDLTVQFRLGGGLFRR-KTYLRAVDG 295

Query: 305 MSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRSKM 364
           +S ++ +G++LG+VGESGSGKST G AIL+LL S G+IRF G+ L  L  ++M P+R +M
Sbjct: 296 ISLSVQRGKTLGIVGESGSGKSTLGQAILRLLDSTGSIRFQGEALDPLNNQQMRPWRKQM 355

Query: 365 QVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDTRHRYPNE 424
           QVVFQDPY +L+PRM+V Q+I EGL VH+  +  + D  +  V+++VGLD  +RHRYP+E
Sbjct: 356 QVVFQDPYGSLSPRMTVEQIISEGLEVHAPCSLADRDAQVIQVLKDVGLDPASRHRYPHE 415

Query: 425 FSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHD 484
           FSGGQRQRIAIARALVLKP  +LLDEPTS+LDRTVQ QV+ LL++LQ KY LTYLFISHD
Sbjct: 416 FSGGQRQRIAIARALVLKPALMLLDEPTSALDRTVQKQVVALLRELQDKYGLTYLFISHD 475

Query: 485 LAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525
           LAV+RA+ H  IV+K G++VE G + ++F+ P HPYT++L+
Sbjct: 476 LAVVRAMAHDMIVIKDGQVVERGASHAVFDAPQHPYTKELL 516



 Score =  178 bits (451), Expect = 5e-49
 Identities = 104/261 (39%), Positives = 159/261 (60%), Gaps = 15/261 (5%)

Query: 5   VLKIDNLSVGFGIAGQA------RPVTEGVSLTIARGETLALVGESGSGKSVTANAILRL 58
           VL++D+L+V F + G            +G+SL++ RG+TL +VGESGSGKS    AILRL
Sbjct: 267 VLQVDDLTVQFRLGGGLFRRKTYLRAVDGISLSVQRGKTLGIVGESGSGKSTLGQAILRL 326

Query: 59  LPKGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVET 118
           L        +GSI F        + + +R  R  ++ ++FQ+P  SL+P   + + + E 
Sbjct: 327 LDS------TGSIRFQGEALDPLNNQQMRPWRK-QMQVVFQDPYGSLSPRMTVEQIISEG 379

Query: 119 LAIHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELL 178
           L +H        + + I+ L  VG+       + YPHE SGG+RQR+ IA AL+ +P L+
Sbjct: 380 LEVHAPCSLADRDAQVIQVLKDVGL--DPASRHRYPHEFSGGQRQRIAIARALVLKPALM 437

Query: 179 IADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVET 238
           + DEPT+ALD +VQ Q++ LL+ LQ + G+  LFI+HDL++VR +A  + V++ GQ+VE 
Sbjct: 438 LLDEPTSALDRTVQKQVVALLRELQDKYGLTYLFISHDLAVVRAMAHDMIVIKDGQVVER 497

Query: 239 NACHTLFAAPAHPYTQQLINA 259
            A H +F AP HPYT++L+ A
Sbjct: 498 GASHAVFDAPQHPYTKELLAA 518