Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 546 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  469 bits (1208), Expect = e-137
 Identities = 270/541 (49%), Positives = 357/541 (65%), Gaps = 22/541 (4%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPK--- 61
           ++ +  L V FG     + V  G+   IA GE LALVGESGSGK+VTA ++LRL+     
Sbjct: 12  LIDVKGLRVAFG----GKEVVHGIDFQIAAGEKLALVGESGSGKTVTALSLLRLVQNADV 67

Query: 62  -GSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
            G A            D L   ER LRGIRG  I MIFQEPM +LN L+ +G Q+ E L 
Sbjct: 68  TGEARLYGAERQQAPRDLLSIPERELRGIRGKEIAMIFQEPMTALNALYSVGDQIAEVLE 127

Query: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
           +H  L A AA+  A++ L   GI  P  +  A+PH+LSGG+RQR MIAMAL  +P LL+A
Sbjct: 128 LHEALSARAAQAAAVQLLADTGIPEPARRARAFPHQLSGGQRQRAMIAMALACKPRLLLA 187

Query: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
           DEPTTALDV+V+AQILDLL  LQ + GMA+L ITHDL++VRR ADRV VM++G +VE  A
Sbjct: 188 DEPTTALDVTVRAQILDLLADLQHKYGMAVLLITHDLNLVRRFADRVVVMENGHVVEHGA 247

Query: 241 CHTLFAAPAHPYTQQLINADP-RGVPVPTAMDAPT-LLQAEKLRVWFPIK----GGYFRR 294
              +F AP HPYT++LI++ P R V    A  A   +L+A+ LRV +P+     GG+FR+
Sbjct: 248 VAPVFDAPQHPYTRKLIDSHPTRDVAAVQASPAAVPVLEAKALRVIYPVPKPGIGGWFRK 307

Query: 295 TQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKR 354
            +    AV    F +  G++LG+VGESGSGKST  +A L LL  QGA++ AG+D  A+ R
Sbjct: 308 GE--FVAVQGADFRIVPGETLGVVGESGSGKSTLALAALGLLKHQGALKIAGKD-WAVDR 364

Query: 355 REMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHS-QLNDDEIDHAICAVMQEVGL 413
              L  R  MQVVFQDP+S+L+PRM+V Q++GEGLRVH+ +L  +       A + +VGL
Sbjct: 365 ASDLGLRRVMQVVFQDPFSSLSPRMTVEQIVGEGLRVHAPELGVEARRARSLAALADVGL 424

Query: 414 D----VDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKD 469
                     RYP+EFSGGQRQR+AIARAL++ P+ ++LDEPTS+LD T+Q QVL LL+ 
Sbjct: 425 TESQFPSLLDRYPHEFSGGQRQRLAIARALIVDPQLLVLDEPTSALDVTIQKQVLGLLQR 484

Query: 470 LQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLSL 529
           LQ++  L+YL I+HD+ VIRA+ H  IVMK G I+E G  + +   P HPYT++LV  +L
Sbjct: 485 LQRERGLSYLLITHDVEVIRAMAHQVIVMKDGAILETGPVERVLGAPEHPYTKKLVAAAL 544

Query: 530 L 530
           L
Sbjct: 545 L 545