Pairwise Alignments
Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 556 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) / ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45
Score = 383 bits (983), Expect = e-110
Identities = 216/523 (41%), Positives = 319/523 (60%), Gaps = 7/523 (1%)
Query: 5 VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
++ ++ L++ G+ G R + VS IA GE + +VGESGSGK+ A AI+ L P
Sbjct: 11 LVSVEGLTLAVGMGG--REIVRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLV 68
Query: 65 HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHR- 123
+G I F D + LR +RG R+GM+FQEPM SLNP IGKQLVE LA+HR
Sbjct: 69 R-TAGRILFEGEDLTQAKPARLRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHRR 127
Query: 124 GLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEP 183
L A ++ ++ L +VGIR P+ ++A+PHE SGG RQR+M+A ++ EP LLIADEP
Sbjct: 128 DLSPAARRERILDMLARVGIRDPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEP 187
Query: 184 TTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHT 243
TTALD VQ +L+L+ L +E A+L I+HDL +V R R+ VM+ G+++ET
Sbjct: 188 TTALDAVVQRDVLELMVGLTREHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDD 247
Query: 244 LFAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVT 303
+ P H YT++L+ A P +P D +++ L V + F +T +A+
Sbjct: 248 MLEQPRHAYTRELLQAMPHRLPARQVPDEAPVVEVRNLVVDYAGHRRLFAKTVPK-RALH 306
Query: 304 DMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLA-SQGAIRFAGQDLQALKRREMLPYRS 362
+ + + + +VG SGSGK+T G I LL S G I F G+ + YR
Sbjct: 307 GIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSGGEIMFRGRPILR-SDAGWSDYRL 365
Query: 363 KMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDTRHRYP 422
+ Q+VFQDPY++L+PRM++ Q++GEGLR+ ++ + + V++EVGL RY
Sbjct: 366 QCQMVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRARRVQEVLEEVGLGTGFAPRYA 425
Query: 423 NEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFIS 482
+E SGGQRQR+AIARA+V +P F++ DEP S+LD TV+AQVL L +LQ+++ + LFIS
Sbjct: 426 HELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKRHGFSCLFIS 485
Query: 483 HDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525
HDL V+ + +VM+ G IVE G ++F+ P+ YT++L+
Sbjct: 486 HDLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLL 528
Score = 154 bits (388), Expect = 1e-41
Identities = 97/236 (41%), Positives = 138/236 (58%), Gaps = 11/236 (4%)
Query: 27 GVSLTIARGETLALVGESGSGKSVTANAILRLL-PKGSAHYLSGSIHFGDVDTLRCSERA 85
G+ L + E +A+VG SGSGK+ I LL P G G I F LR S+
Sbjct: 307 GIDLVVRPREVVAVVGGSGSGKTTLGRTIAGLLQPSG------GEIMFRGRPILR-SDAG 359
Query: 86 LRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAIEWLGKVGIRH 145
R + M+FQ+P SL+P IG+ + E L + +G+ ++ E L +VG+
Sbjct: 360 WSDYRL-QCQMVFQDPYASLDPRMTIGQLVGEGLRLVKGMSTADRARRVQEVLEEVGLGT 418
Query: 146 PEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSLQQE 205
Y HELSGG+RQRV IA A++ P +IADEP +ALDV+V+AQ+L L LQ+
Sbjct: 419 GFAP--RYAHELSGGQRQRVAIARAIVRRPAFVIADEPVSALDVTVRAQVLALFAELQKR 476
Query: 206 LGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQLINADP 261
G + LFI+HDL +V ++ADRV VMQ G++VE + T+F AP YT++L++A P
Sbjct: 477 HGFSCLFISHDLGVVEQVADRVVVMQDGRIVEQGSRDTVFDAPTQDYTRKLLSAIP 532
Score = 151 bits (382), Expect = 5e-41
Identities = 83/234 (35%), Positives = 140/234 (59%), Gaps = 9/234 (3%)
Query: 302 VTDMSFTLAKGQSLGLVGESGSGKSTTGMAIL-----KLLASQGAIRFAGQDLQALKRRE 356
V ++SF +A G+ +G+VGESGSGK+ AI+ L+ + G I F G+DL K
Sbjct: 29 VRNVSFDIAPGEMVGIVGESGSGKTQAARAIMGLTPPPLVRTAGRILFEGEDLTQAKPAR 88
Query: 357 MLPYR-SKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQ-LNDDEIDHAICAVMQEVGL- 413
+ R +++ +VFQ+P ++LNP M++ + + E L +H + L+ I ++ VG+
Sbjct: 89 LRELRGARVGMVFQEPMTSLNPSMTIGKQLVEALALHRRDLSPAARRERILDMLARVGIR 148
Query: 414 -DVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQ 472
+P+EFSGG RQR+ +A ++L+P ++ DEPT++LD VQ VL+L+ L +
Sbjct: 149 DPKGALDAWPHEFSGGMRQRMMLASVMLLEPALLIADEPTTALDAVVQRDVLELMVGLTR 208
Query: 473 KYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVR 526
+++ L ISHDL ++ +VM+ GE++E G T + E P H YT++L++
Sbjct: 209 EHRTAVLMISHDLPMVARFTQRMVVMRHGEVMETGRTDDMLEQPRHAYTRELLQ 262