Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 571 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  407 bits (1047), Expect = e-118
 Identities = 229/557 (41%), Positives = 334/557 (59%), Gaps = 36/557 (6%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLL-PKGS 63
           +L++ NL + +          + ++L I RGE + +VGESG+GKS   NA++ LL P G+
Sbjct: 3   LLEVKNLRIEYPSRHGVHAAVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVIDLLSPPGT 62

Query: 64  AHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHR 123
                G ++         S +A+R +RG +IG IFQ+PM SLNPL  +  QL ET+  + 
Sbjct: 63  I--AGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTETIHANM 120

Query: 124 GLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEP 183
            + A  A Q+A+  + +VGI  PE ++  YPH+ SGG RQRV+IA+AL  EP+L+IADEP
Sbjct: 121 QVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDLIIADEP 180

Query: 184 TTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHT 243
           TTALDVS+Q QIL+L++ L ++  +  + +THD+ +V  + DRVAVM  G LVE      
Sbjct: 181 TTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVEFGPTAK 240

Query: 244 LFAAPAHPYTQQLINADPRG------VPVPTAMDAPT----------------------- 274
           +   P HPYT+ LI+A PR        P+ + ++                          
Sbjct: 241 VLGTPEHPYTRSLISAVPRSDRKLDRFPLVSYIEEAKELKPLDVKSHWLGQSQDHRKYTG 300

Query: 275 -LLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAIL 333
            LL+ E + + F  K   F   + Y++A  ++SF + +G++ GLVGESGSGKST    I 
Sbjct: 301 PLLKVENVNLRFVTKDSLFESRREYVQASNNVSFAVHEGETFGLVGESGSGKSTIARVIA 360

Query: 334 KLLA-SQGAIRFAGQDLQALK-RREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRV 391
            L   + G + F G DL ALK   E  P R +MQ+VFQ+PY+++NPRM +  +I E +R 
Sbjct: 361 GLYQPNAGRVTFEGIDLTALKSEHERRPLRRQMQMVFQNPYTSMNPRMKIFDIIAEPIRF 420

Query: 392 HSQL-NDDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDE 450
           H    ++ E    +  +++ VGL      +YP+EFSGGQRQRI+IARAL  +P  ++ DE
Sbjct: 421 HKLTRSESETRQIVNDLLEHVGLGKMAGLKYPHEFSGGQRQRISIARALATRPRLLICDE 480

Query: 451 PTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQ 510
           PTS+LD +VQAQ+L+LLKDLQ +  LT LFISHDL VIR +C    VM+ G ++E   T+
Sbjct: 481 PTSALDVSVQAQILNLLKDLQDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTE 540

Query: 511 SLFENPSHPYTQQLVRL 527
            LF +P H Y+++L+ L
Sbjct: 541 QLFTDPQHEYSKKLISL 557



 Score =  175 bits (444), Expect = 4e-48
 Identities = 106/239 (44%), Positives = 143/239 (59%), Gaps = 10/239 (4%)

Query: 25  TEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFGDVD-TLRCSE 83
           +  VS  +  GET  LVGESGSGKS  A  I  L    +     G + F  +D T   SE
Sbjct: 329 SNNVSFAVHEGETFGLVGESGSGKSTIARVIAGLYQPNA-----GRVTFEGIDLTALKSE 383

Query: 84  RALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAI-EWLGKVG 142
              R +R  ++ M+FQ P  S+NP  KI   + E +  H+  R+ +  ++ + + L  VG
Sbjct: 384 HERRPLRR-QMQMVFQNPYTSMNPRMKIFDIIAEPIRFHKLTRSESETRQIVNDLLEHVG 442

Query: 143 IRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSL 202
           +   ++    YPHE SGG+RQR+ IA AL   P LLI DEPT+ALDVSVQAQIL+LLK L
Sbjct: 443 LG--KMAGLKYPHEFSGGQRQRISIARALATRPRLLICDEPTSALDVSVQAQILNLLKDL 500

Query: 203 QQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQLINADP 261
           Q EL + MLFI+HDL ++R++ DRV VMQ G L+E      LF  P H Y+++LI+  P
Sbjct: 501 QDELNLTMLFISHDLPVIRQMCDRVGVMQMGTLLEVAPTEQLFTDPQHEYSKKLISLMP 559



 Score =  162 bits (411), Expect = 2e-44
 Identities = 88/260 (33%), Positives = 153/260 (58%), Gaps = 15/260 (5%)

Query: 274 TLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAIL 333
           +LL+ + LR+ +P + G          AV  ++  + +G+ +G+VGESG+GKST G A++
Sbjct: 2   SLLEVKNLRIEYPSRHGVHA-------AVKSLTLDIQRGEIVGVVGESGAGKSTVGNAVI 54

Query: 334 KLLASQGAIR-----FAGQDLQALKRREMLPYR-SKMQVVFQDPYSALNPRMSVAQVIGE 387
            LL+  G I        G+ +  L  + M   R SK+  +FQDP ++LNP  +V   + E
Sbjct: 55  DLLSPPGTIAGGEVYLNGEKISGLSPQAMREVRGSKIGFIFQDPMTSLNPLFTVEHQLTE 114

Query: 388 GLRVHSQLNDDEIDHAICAVMQEVGLDVDTRH--RYPNEFSGGQRQRIAIARALVLKPEF 445
            +  + Q++ +E      ++M++VG+        +YP++FSGG RQR+ IA AL  +P+ 
Sbjct: 115 TIHANMQVSAEEAYQRALSLMKQVGIPQPENRLKQYPHQFSGGMRQRVVIAIALAGEPDL 174

Query: 446 ILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVE 505
           I+ DEPT++LD ++Q Q+L+L+++L +K  +  + ++HD+ V+  +     VM  G++VE
Sbjct: 175 IIADEPTTALDVSIQDQILNLIRELCKKNNVGCMLVTHDMGVVSNVTDRVAVMYRGDLVE 234

Query: 506 HGETQSLFENPSHPYTQQLV 525
            G T  +   P HPYT+ L+
Sbjct: 235 FGPTAKVLGTPEHPYTRSLI 254