Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., fused predicted oligopeptide transporter subunits of ABC superfamilly: ATP-binding components (NCBI) from Escherichia coli BW25113

 Score =  624 bits (1608), Expect = 0.0
 Identities = 328/529 (62%), Positives = 397/529 (75%), Gaps = 1/529 (0%)

Query: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
           M   +L I+NLSVGF      R V   VSL I  GETLALVGESGSGKSVTA +ILRLLP
Sbjct: 1   MTQTLLAIENLSVGFRHQQTVRTVVNDVSLQIEAGETLALVGESGSGKSVTALSILRLLP 60

Query: 61  KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
                YLSG I F     L  S++ LRG+RG +I MIFQEPMVSLNPLH + KQL E L+
Sbjct: 61  SPPVEYLSGDIRFHGESLLHASDQTLRGVRGNKIAMIFQEPMVSLNPLHTLEKQLYEVLS 120

Query: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
           +HRG+R  AA  + +  L +VGIR    ++  YPH+LSGGERQRVMIAMAL+  PELLIA
Sbjct: 121 LHRGMRREAARGEILNCLDRVGIRQAAKRLTDYPHQLSGGERQRVMIAMALLTRPELLIA 180

Query: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
           DEPTTALDVSVQAQIL LL+ LQ EL M MLFITH+LSIVR++A RVAVMQ+G+ VE N 
Sbjct: 181 DEPTTALDVSVQAQILQLLRELQGELNMGMLFITHNLSIVRKLAHRVAVMQNGRCVEQNY 240

Query: 241 CHTLFAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIK 300
             TLFA+P HPYTQ+L+N++P G PVP    A TLL  E+L+V FPI+ G  +R   +  
Sbjct: 241 AATLFASPTHPYTQKLLNSEPSGDPVPLPEPASTLLDVEQLQVAFPIRKGILKRIVDHNV 300

Query: 301 AVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPY 360
            V ++SFTL  G++LGLVGESGSGKSTTG+A+L+L+ SQG+I F GQ LQ L RR++LP 
Sbjct: 301 VVKNISFTLRAGETLGLVGESGSGKSTTGLALLRLINSQGSIIFDGQPLQNLNRRQLLPI 360

Query: 361 RSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHS-QLNDDEIDHAICAVMQEVGLDVDTRH 419
           R ++QVVFQDP S+LNPR++V Q+I EGLRVH   L+  + +  + AVM EVGLD +TRH
Sbjct: 361 RHRIQVVFQDPNSSLNPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMHEVGLDPETRH 420

Query: 420 RYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYL 479
           RYP EFSGGQRQRIAIARAL+LKP  I+LDEPTSSLD+TVQAQ+L LLK LQQK+QL YL
Sbjct: 421 RYPAEFSGGQRQRIAIARALILKPSLIILDEPTSSLDKTVQAQILTLLKSLQQKHQLAYL 480

Query: 480 FISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLS 528
           FISHDL V+RALCH  I+++ GE+VE G    +F  P   YT+QL+ LS
Sbjct: 481 FISHDLHVVRALCHQVIILRQGEVVEQGPCARVFATPQQEYTRQLLALS 529