Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 527 a.a., microcin C ABC transporter ATP-binding protein YejF from Erwinia tracheiphila SCR3

 Score =  601 bits (1550), Expect = e-176
 Identities = 311/524 (59%), Positives = 396/524 (75%), Gaps = 1/524 (0%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           +L I NLS+ F     +R V + +SL++A GETLALVGESGSGKSVTA +I+RLLP+   
Sbjct: 3   LLTIKNLSIAFREGAASRQVVDNLSLSVAAGETLALVGESGSGKSVTALSIMRLLPEPPV 62

Query: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
            Y  G I F   D L+ SE  LR +RG RI MIFQEPMVSLNPLH I KQL E L++HR 
Sbjct: 63  IYPQGEIMFAGNDLLKASENTLRALRGNRIAMIFQEPMVSLNPLHNIEKQLYEVLSLHRR 122

Query: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184
           +R  AA  + +  L +VGIR    ++NA+PH+LSGGERQRVMIAMAL+ +P LLIADEPT
Sbjct: 123 MRKEAARAEMLNCLDRVGIRQASKRLNAFPHQLSGGERQRVMIAMALLTQPALLIADEPT 182

Query: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244
           TALDV+VQAQIL LLK L+QEL M +LFITH+L+IVR++AD VAVMQ+GQ VE+N+   L
Sbjct: 183 TALDVTVQAQILVLLKELKQELNMGLLFITHNLNIVRQLADNVAVMQNGQNVESNSWQQL 242

Query: 245 FAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTD 304
           F+AP+HPYT+ L++A+P G+P P    A  LL+ + L V+ P+K    RRT     A+  
Sbjct: 243 FSAPSHPYTRALLDAEPDGLPAPCDTLARPLLRVQALTVYLPVKRSLMRRTDEPYHALKS 302

Query: 305 MSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRSKM 364
           +SFTL  G++LGLVGESGSGKSTTG+A+L+L+ASQG I F  Q L    RR+MLP R ++
Sbjct: 303 LSFTLRSGETLGLVGESGSGKSTTGLALLRLIASQGEIWFDEQPLHLFDRRKMLPIRRQI 362

Query: 365 QVVFQDPYSALNPRMSVAQVIGEGLRV-HSQLNDDEIDHAICAVMQEVGLDVDTRHRYPN 423
           QVVFQDP S++NPR++VAQ+I EGL V H +L+  + + ++ AVM+EVGLD +TRHRYP 
Sbjct: 363 QVVFQDPNSSMNPRLTVAQIIAEGLLVHHPELSLAQREESVIAVMREVGLDPETRHRYPT 422

Query: 424 EFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISH 483
            FSGGQRQRIAIARA++LKP+ I+LDEPTSSLDR+VQ Q+L LLK LQQ + L Y+FISH
Sbjct: 423 AFSGGQRQRIAIARAVILKPKLIILDEPTSSLDRSVQKQILTLLKKLQQDHSLAYIFISH 482

Query: 484 DLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRL 527
           DL VIR+LCH  +V++ GE+VE GE + +F  P  PYTQQL+ L
Sbjct: 483 DLQVIRSLCHQMVVLRQGEVVEQGECEHIFIAPEQPYTQQLLAL 526