Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 529 a.a., ABC-type uncharacterized transport system, duplicated ATPase component from Enterobacter asburiae PDN3

 Score =  606 bits (1563), Expect = e-178
 Identities = 317/526 (60%), Positives = 391/526 (74%), Gaps = 1/526 (0%)

Query: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
           M   +L IDNLS+ F   G+ R V   +SL I  GETLALVGESGSGKSV+A +ILRLLP
Sbjct: 1   MTQPLLSIDNLSIAFSTQGETRTVVTDLSLQIQPGETLALVGESGSGKSVSALSILRLLP 60

Query: 61  KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
                Y  G I F     L   E  LRGIRG +I MIFQEPMVSLNPLH + KQL E L+
Sbjct: 61  SPPVSYPQGDILFHGSSLLHADEHTLRGIRGNKIAMIFQEPMVSLNPLHSLEKQLYEVLS 120

Query: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
           +HRG+R  AA  + ++ L + GIR+   ++N +PH+LSGGERQRVMIAMAL+  PELLIA
Sbjct: 121 LHRGMRKEAARGEILDCLERTGIRNAAKRLNDFPHQLSGGERQRVMIAMALLTRPELLIA 180

Query: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
           DEPTTALDV+VQAQIL LL+ L+ EL M++LFITH+LSIVR++AD VAVMQ+G+ VE N+
Sbjct: 181 DEPTTALDVTVQAQILTLLRELRDELNMSLLFITHNLSIVRKLADSVAVMQNGRCVEQNS 240

Query: 241 CHTLFAAPAHPYTQQLINADPRGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIK 300
             TL +AP HPYTQ+L++++P G PVP A D+  LL+ E L V FPI+ G  RR      
Sbjct: 241 ASTLLSAPQHPYTQRLLDSEPSGDPVPLAADSTPLLRVEDLSVSFPIRKGILRRIVDQNP 300

Query: 301 AVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAIRFAGQDLQALKRREMLPY 360
            + ++ F+L  G+SLGLVGESGSGKSTTG+A+L+L+ASQG I F    L    RR+MLP 
Sbjct: 301 VLKNIRFSLRPGESLGLVGESGSGKSTTGLALLRLIASQGEIFFDDMPLHRWNRRQMLPV 360

Query: 361 RSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQ-LNDDEIDHAICAVMQEVGLDVDTRH 419
           R +MQVVFQDP S+LNPR+SV Q+I EGLRVH   L+  + +  +  VM EVGLD  TRH
Sbjct: 361 RPRMQVVFQDPNSSLNPRLSVLQIIEEGLRVHQPGLSAQQREQEVMRVMAEVGLDAGTRH 420

Query: 420 RYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYL 479
           RYP EFSGGQRQRIAIARAL+LKPE I+LDEPTSSLDRTVQAQ+L LLK LQ+K++L Y+
Sbjct: 421 RYPAEFSGGQRQRIAIARALILKPELIILDEPTSSLDRTVQAQILALLKGLQEKHRLAYI 480

Query: 480 FISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525
           FISHDL V+RALCH  IV++ GE+VE GE Q +F  P+  YT+QL+
Sbjct: 481 FISHDLQVVRALCHQVIVLRQGEVVEQGECQRVFSAPTQRYTRQLL 526



 Score =  184 bits (468), Expect = 5e-51
 Identities = 111/268 (41%), Positives = 165/268 (61%), Gaps = 25/268 (9%)

Query: 5   VLKIDNLSVGFGIAG-------QARPVTEGVSLTIARGETLALVGESGSGKSVTANAILR 57
           +L++++LSV F I            PV + +  ++  GE+L LVGESGSGKS T  A+LR
Sbjct: 275 LLRVEDLSVSFPIRKGILRRIVDQNPVLKNIRFSLRPGESLGLVGESGSGKSTTGLALLR 334

Query: 58  LLPKGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVE 117
           L+         G I F D+   R + R +  +R  R+ ++FQ+P  SLNP   + + + E
Sbjct: 335 LIAS------QGEIFFDDMPLHRWNRRQMLPVRP-RMQVVFQDPNSSLNPRLSVLQIIEE 387

Query: 118 TLAIHR-GLRATAAEQKAIEWLGKVGI----RHPEIKINAYPHELSGGERQRVMIAMALI 172
            L +H+ GL A   EQ+ +  + +VG+    RH       YP E SGG+RQR+ IA ALI
Sbjct: 388 GLRVHQPGLSAQQREQEVMRVMAEVGLDAGTRH------RYPAEFSGGQRQRIAIARALI 441

Query: 173 NEPELLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQS 232
            +PEL+I DEPT++LD +VQAQIL LLK LQ++  +A +FI+HDL +VR +  +V V++ 
Sbjct: 442 LKPELIILDEPTSSLDRTVQAQILALLKGLQEKHRLAYIFISHDLQVVRALCHQVIVLRQ 501

Query: 233 GQLVETNACHTLFAAPAHPYTQQLINAD 260
           G++VE   C  +F+AP   YT+QL++AD
Sbjct: 502 GEVVEQGECQRVFSAPTQRYTRQLLSAD 529