Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 565 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  421 bits (1081), Expect = e-122
 Identities = 247/556 (44%), Positives = 333/556 (59%), Gaps = 49/556 (8%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           +L+I +L V F           G+ L +  GETLALVGESG GKS TA +I+RL+  G+ 
Sbjct: 4   LLEIQDLRVTF----PGHQAVRGLDLALNPGETLALVGESGCGKSATALSIMRLV--GAP 57

Query: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
             ++G I F   D L     A+R +RG  I MIFQEPM SLNP+  IG+Q+VETL  H+ 
Sbjct: 58  GQVAGRILFNGQDLLALPNTAMRQLRGNAISMIFQEPMTSLNPVLTIGQQIVETLRTHQP 117

Query: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184
           L    A  +AIE L  V I  P  +I+ YPH+LSGG+RQRVMIAMA+  +P LLIADEPT
Sbjct: 118 LTPAQARARAIELLDLVKIPEPPRRIDDYPHQLSGGQRQRVMIAMAVACQPTLLIADEPT 177

Query: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244
           TALDV++QAQIL LL  L++EL M++L ITHDL +V + ADRVAVM  G+ VE  +   L
Sbjct: 178 TALDVTIQAQILALLDQLRRELSMSLLLITHDLGVVEQWADRVAVMVGGRKVEEASTEVL 237

Query: 245 FAAPAHPYTQQLI------------------------NADP----------RGVPVPTAM 270
           F  P HPYT+ L+                        N D           R VP P   
Sbjct: 238 FQQPQHPYTRGLLATSLHLAGDLHYRRQRLPEIRHPDNGDAGQVTVVTPPLRSVPPPDTT 297

Query: 271 DAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGM 330
            AP LL   ++          +   Q  + AV D+S  +  G++LGLVGESG GKST   
Sbjct: 298 RAP-LLSLHRVHT-------RYATPQGVVTAVKDISLDIYPGETLGLVGESGCGKSTLSK 349

Query: 331 AILKLL-ASQGAIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGL 389
            IL+LL  + G + F GQD+  L  R++ P R ++Q++FQDPY++LNPR  V +++   L
Sbjct: 350 TILRLLPVAAGRMLFDGQDITPLNERQLQPLRRRVQMIFQDPYASLNPRHDVQRILERPL 409

Query: 390 RVHSQLNDDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLD 449
            VH      +    I   ++ V L   +  RYP+EFSGGQRQRI IARALV+ P  ++ D
Sbjct: 410 IVHGVTRRAQRQRLISQALERVRLPQSSLQRYPHEFSGGQRQRIGIARALVVNPSLVICD 469

Query: 450 EPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGET 509
           EP S+LD ++QAQ+L+LL +L+ +  L+ LFISHDL+V+R +    +VM+ GE VE G+ 
Sbjct: 470 EPVSALDVSIQAQILNLLVELKSEMGLSLLFISHDLSVVRYIADRVMVMQHGECVESGDC 529

Query: 510 QSLFENPSHPYTQQLV 525
           Q ++  P HPYT+ L+
Sbjct: 530 QQIWRQPQHPYTRLLL 545



 Score =  200 bits (508), Expect = 1e-55
 Identities = 112/239 (46%), Positives = 152/239 (63%), Gaps = 8/239 (3%)

Query: 28  VSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFGDVDTLRCSERALR 87
           +SL I  GETL LVGESG GKS  +  ILRLLP  +   L     F   D    +ER L+
Sbjct: 324 ISLDIYPGETLGLVGESGCGKSTLSKTILRLLPVAAGRML-----FDGQDITPLNERQLQ 378

Query: 88  GIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAIEWLGKVGIRHPE 147
            +R  R+ MIFQ+P  SLNP H + + L   L +H   R    ++   + L +V  R P+
Sbjct: 379 PLRR-RVQMIFQDPYASLNPRHDVQRILERPLIVHGVTRRAQRQRLISQALERV--RLPQ 435

Query: 148 IKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSLQQELG 207
             +  YPHE SGG+RQR+ IA AL+  P L+I DEP +ALDVS+QAQIL+LL  L+ E+G
Sbjct: 436 SSLQRYPHEFSGGQRQRIGIARALVVNPSLVICDEPVSALDVSIQAQILNLLVELKSEMG 495

Query: 208 MAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQLINADPRGVPV 266
           +++LFI+HDLS+VR IADRV VMQ G+ VE+  C  ++  P HPYT+ L+++ P   P+
Sbjct: 496 LSLLFISHDLSVVRYIADRVMVMQHGECVESGDCQQIWRQPQHPYTRLLLDSVPGRQPL 554



 Score =  166 bits (421), Expect = 2e-45
 Identities = 99/262 (37%), Positives = 148/262 (56%), Gaps = 18/262 (6%)

Query: 275 LLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILK 334
           LL+ + LRV FP   G+        +AV  +   L  G++L LVGESG GKS T ++I++
Sbjct: 4   LLEIQDLRVTFP---GH--------QAVRGLDLALNPGETLALVGESGCGKSATALSIMR 52

Query: 335 LLASQGAIR----FAGQDLQALKRREMLPYRSK-MQVVFQDPYSALNPRMSVAQVIGEGL 389
           L+ + G +     F GQDL AL    M   R   + ++FQ+P ++LNP +++ Q I E L
Sbjct: 53  LVGAPGQVAGRILFNGQDLLALPNTAMRQLRGNAISMIFQEPMTSLNPVLTIGQQIVETL 112

Query: 390 RVHSQLNDDEIDHAICAVMQEVGLDVDTRH--RYPNEFSGGQRQRIAIARALVLKPEFIL 447
           R H  L   +       ++  V +    R    YP++ SGGQRQR+ IA A+  +P  ++
Sbjct: 113 RTHQPLTPAQARARAIELLDLVKIPEPPRRIDDYPHQLSGGQRQRVMIAMAVACQPTLLI 172

Query: 448 LDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHG 507
            DEPT++LD T+QAQ+L LL  L+++  ++ L I+HDL V+        VM  G  VE  
Sbjct: 173 ADEPTTALDVTIQAQILALLDQLRRELSMSLLLITHDLGVVEQWADRVAVMVGGRKVEEA 232

Query: 508 ETQSLFENPSHPYTQQLVRLSL 529
            T+ LF+ P HPYT+ L+  SL
Sbjct: 233 STEVLFQQPQHPYTRGLLATSL 254