Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola ME23

 Score =  436 bits (1122), Expect = e-127
 Identities = 248/549 (45%), Positives = 333/549 (60%), Gaps = 25/549 (4%)

Query: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
           MN  VL+I+ L+  F + G+   V + +S  I   ET+ALVGESGSGKSVTA +I+RLL 
Sbjct: 1   MNQPVLRIEQLNTAFRVNGEWLNVVQDLSFEIGERETVALVGESGSGKSVTALSIMRLLA 60

Query: 61  KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
            G     +G   F   D L    R ++ IRG RIGM+FQEPM SLNP+ KIG Q+ E L 
Sbjct: 61  -GPQVRTTGRALFDGRDLLALPAREMQHIRGNRIGMVFQEPMTSLNPVLKIGTQITEVLR 119

Query: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
            HRG+    A  +A+  L KV I     +++ YP   SGG RQRV+IA+AL   P LLI 
Sbjct: 120 RHRGMDHAGARAEAVRLLEKVRIPAARSRLDEYPLSFSGGMRQRVVIAIALACHPRLLIV 179

Query: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
           DEPTTALDV++QAQIL L+K+LQ E GM++LFITHD+ +V  +ADR  VM  G  VE   
Sbjct: 180 DEPTTALDVTIQAQILALIKTLQDEEGMSILFITHDMGVVAEVADRTMVMYHGAGVEMAD 239

Query: 241 CHTLFAAPAHPYTQQLINADPR----------------------GVPVP-TAMDAPTLLQ 277
              LF AP HPY++ L +A PR                        P+  T      +L 
Sbjct: 240 TRRLFRAPQHPYSKTLFSALPRLGDMADSRLPRRFALFGQSAAASAPLADTVTPGEPVLA 299

Query: 278 AEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLA 337
              L   F +K G+ RR    + AV ++SF+L  G++L LVGESG GKST G AIL+LL 
Sbjct: 300 VRGLIKRFEVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTAGRAILRLLE 359

Query: 338 SQG-AIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLN 396
             G A+   G+++ A     +   R + Q++FQDPY +LNPR++V   I E +  H   +
Sbjct: 360 PNGGAVSLCGENMLAAGASALAGLRMRAQMIFQDPYDSLNPRLTVGCAIAEPMISHGLAS 419

Query: 397 DDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLD 456
             +    +  ++++VGL  D   RYP++FSGGQRQR+ IARAL L P  I+ DE  S+LD
Sbjct: 420 ARQARQKVAELLEKVGLQADMAERYPHQFSGGQRQRLCIARALALNPRVIIADEAVSALD 479

Query: 457 RTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENP 516
            TV+AQ+++LL DLQQ+  L YLFISHD+AV+  + H   VM  GEIVE G  Q++F +P
Sbjct: 480 MTVKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFNDP 539

Query: 517 SHPYTQQLV 525
            HPYT++L+
Sbjct: 540 QHPYTRRLL 548



 Score =  188 bits (478), Expect = 4e-52
 Identities = 117/252 (46%), Positives = 155/252 (61%), Gaps = 15/252 (5%)

Query: 17  IAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLL-PKGSAHYLSGSIHFGD 75
           + G+   V E VS ++  GETL+LVGESG GKS    AILRLL P G A  L G      
Sbjct: 317 VTGRVHAV-ENVSFSLQPGETLSLVGESGCGKSTAGRAILRLLEPNGGAVSLCGE----- 370

Query: 76  VDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAI 135
            + L     AL G+R  R  MIFQ+P  SLNP   +G  + E +  H    A  A QK  
Sbjct: 371 -NMLAAGASALAGLRM-RAQMIFQDPYDSLNPRLTVGCAIAEPMISHGLASARQARQKVA 428

Query: 136 EWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQI 195
           E L KVG++    +   YPH+ SGG+RQR+ IA AL   P ++IADE  +ALD++V+AQI
Sbjct: 429 ELLEKVGLQADMAE--RYPHQFSGGQRQRLCIARALALNPRVIIADEAVSALDMTVKAQI 486

Query: 196 LDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQ 255
           ++LL  LQQ+LG+A LFI+HD+++V RI+ RVAVM  G++VE      +F  P HPYT++
Sbjct: 487 VNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFNDPQHPYTRR 546

Query: 256 LINADPRGVPVP 267
           L+ A    VPVP
Sbjct: 547 LLAA----VPVP 554