Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., ABC transporter ATP-binding protein from Dickeya dianthicola 67-19

 Score =  422 bits (1084), Expect = e-122
 Identities = 249/556 (44%), Positives = 334/556 (60%), Gaps = 49/556 (8%)

Query: 5   VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
           +L+I +L V F           G+ L +  GETLALVGESG GKS TA +I+RL+   + 
Sbjct: 4   LLEIQDLRVTF----PGHQAVRGLDLALNPGETLALVGESGCGKSATALSIMRLV--SAP 57

Query: 65  HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
             ++G I F   D L   + A+R +RG  I MIFQEPM SLNP+  IG+Q+VETL  H+ 
Sbjct: 58  GQVAGRILFDGQDLLALPDTAMRQLRGNAISMIFQEPMTSLNPVLTIGQQVVETLRTHQP 117

Query: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184
           L    A  +AIE L  V I  P  +I+ YPH+LSGG+RQRVMIAMA+  +P+LLIADEPT
Sbjct: 118 LTPAQARARAIELLDLVKIPEPARRIDDYPHQLSGGQRQRVMIAMAVACQPKLLIADEPT 177

Query: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244
           TALDV++QAQIL LL  L++EL M +L ITHDL +V + ADRVAVM  G+ VE  +   L
Sbjct: 178 TALDVTIQAQILALLDQLRRELSMGLLLITHDLGVVEQWADRVAVMVGGRKVEEASTDVL 237

Query: 245 FAAPAHPYTQQLI------------------------NADP----------RGVPVPTAM 270
           F  P HPYT+ L+                        N D           R VP P   
Sbjct: 238 FQQPQHPYTRGLLATSLHLADDLHYRRQRLPEIRHPDNGDAGQVTVVTPPLRRVPAPDTT 297

Query: 271 DAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGM 330
            AP LL   ++          +   Q  + AV DMS  +  G++LGLVGESG GKST   
Sbjct: 298 RAP-LLSLHQVHT-------RYTTPQGVVNAVKDMSLDIYPGETLGLVGESGCGKSTLSK 349

Query: 331 AILKLL-ASQGAIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGL 389
            IL+LL  + G I F GQD+  L  R++ P R ++Q++FQDPY++LNPR  V +++   L
Sbjct: 350 TILRLLPVAAGRILFDGQDITPLNERQLQPLRRRVQMIFQDPYASLNPRHDVQRILERPL 409

Query: 390 RVHSQLNDDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLD 449
            VH      +    I  V+  VGL   +  RYP+EFSGGQRQRI IARALV+ P  ++ D
Sbjct: 410 IVHGVTRRAQRQRLIDQVLARVGLPQSSLQRYPHEFSGGQRQRIGIARALVVNPSLVICD 469

Query: 450 EPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGET 509
           EP S+LD +++AQ+L+LL +L+ +  L+ LFISHDL+V+R +    +VM+ GE VE G+ 
Sbjct: 470 EPVSALDVSIRAQILNLLVELKSEMGLSLLFISHDLSVVRYIADRVMVMQHGECVESGDY 529

Query: 510 QSLFENPSHPYTQQLV 525
           Q ++  P HPYT+ L+
Sbjct: 530 QQIWRQPQHPYTRLLL 545



 Score =  197 bits (500), Expect = 1e-54
 Identities = 113/235 (48%), Positives = 154/235 (65%), Gaps = 10/235 (4%)

Query: 28  VSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFGDVDTLRCSERALR 87
           +SL I  GETL LVGESG GKS  +  ILRLLP  +     G I F   D    +ER L+
Sbjct: 324 MSLDIYPGETLGLVGESGCGKSTLSKTILRLLPVAA-----GRILFDGQDITPLNERQLQ 378

Query: 88  GIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAIEW-LGKVGIRHP 146
            +R  R+ MIFQ+P  SLNP H + + L   L +H G+   A  Q+ I+  L +VG+  P
Sbjct: 379 PLRR-RVQMIFQDPYASLNPRHDVQRILERPLIVH-GVTRRAQRQRLIDQVLARVGL--P 434

Query: 147 EIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSLQQEL 206
           +  +  YPHE SGG+RQR+ IA AL+  P L+I DEP +ALDVS++AQIL+LL  L+ E+
Sbjct: 435 QSSLQRYPHEFSGGQRQRIGIARALVVNPSLVICDEPVSALDVSIRAQILNLLVELKSEM 494

Query: 207 GMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQLINADP 261
           G+++LFI+HDLS+VR IADRV VMQ G+ VE+     ++  P HPYT+ L+++ P
Sbjct: 495 GLSLLFISHDLSVVRYIADRVMVMQHGECVESGDYQQIWRQPQHPYTRLLLDSVP 549



 Score =  165 bits (417), Expect = 5e-45
 Identities = 98/262 (37%), Positives = 148/262 (56%), Gaps = 18/262 (6%)

Query: 275 LLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILK 334
           LL+ + LRV FP   G+        +AV  +   L  G++L LVGESG GKS T ++I++
Sbjct: 4   LLEIQDLRVTFP---GH--------QAVRGLDLALNPGETLALVGESGCGKSATALSIMR 52

Query: 335 LLASQGAIR----FAGQDLQALKRREMLPYRSK-MQVVFQDPYSALNPRMSVAQVIGEGL 389
           L+++ G +     F GQDL AL    M   R   + ++FQ+P ++LNP +++ Q + E L
Sbjct: 53  LVSAPGQVAGRILFDGQDLLALPDTAMRQLRGNAISMIFQEPMTSLNPVLTIGQQVVETL 112

Query: 390 RVHSQLNDDEIDHAICAVMQEVGLDVDTRH--RYPNEFSGGQRQRIAIARALVLKPEFIL 447
           R H  L   +       ++  V +    R    YP++ SGGQRQR+ IA A+  +P+ ++
Sbjct: 113 RTHQPLTPAQARARAIELLDLVKIPEPARRIDDYPHQLSGGQRQRVMIAMAVACQPKLLI 172

Query: 448 LDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHG 507
            DEPT++LD T+QAQ+L LL  L+++  +  L I+HDL V+        VM  G  VE  
Sbjct: 173 ADEPTTALDVTIQAQILALLDQLRRELSMGLLLITHDLGVVEQWADRVAVMVGGRKVEEA 232

Query: 508 ETQSLFENPSHPYTQQLVRLSL 529
            T  LF+ P HPYT+ L+  SL
Sbjct: 233 STDVLFQQPQHPYTRGLLATSL 254