Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 597 a.a., ABC transporter ATP-binding protein from Dickeya dadantii 3937

 Score =  436 bits (1121), Expect = e-126
 Identities = 246/549 (44%), Positives = 333/549 (60%), Gaps = 25/549 (4%)

Query: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
           MN  VL+++ L+  F + G+   V + +S  I   ET+ALVGESGSGKSVTA +I+RLL 
Sbjct: 1   MNQPVLRVEQLNTAFRVNGEWLKVVQDLSFEIGERETVALVGESGSGKSVTALSIMRLLG 60

Query: 61  KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
            G      G + F   D L    R ++ IRG RIGM+FQEPM SLNP+ KIG Q+ E L 
Sbjct: 61  -GPQVQTRGRVLFDGRDLLALPAREMQHIRGNRIGMVFQEPMTSLNPVLKIGTQITEVLR 119

Query: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
            HRG+    A  +A   L +V I     +++ YP   SGG RQRV+IA+AL   P LLI 
Sbjct: 120 RHRGMDHAGARAEAARLLERVRIPAARSRLDEYPLSFSGGMRQRVVIAIALACNPRLLIV 179

Query: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
           DEPTTALDV++QAQIL L+K+LQ E GM++LFITHD+ +V  +ADR  VM  G  VE   
Sbjct: 180 DEPTTALDVTIQAQILALIKTLQDEEGMSILFITHDMGVVAEVADRTMVMYHGAGVEMAD 239

Query: 241 CHTLFAAPAHPYTQQLINADPR----------------------GVPVP-TAMDAPTLLQ 277
              LF AP HPY++ L +A PR                        P+  T      +L 
Sbjct: 240 TRQLFRAPQHPYSKTLFSAVPRLGEMADTRLPRRFALFGQSAAASEPLADTVTPGEPVLA 299

Query: 278 AEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLA 337
              L   F +K G+ RR    + AV ++SF+L  G++L LVGESG GKSTTG AIL+LL 
Sbjct: 300 VRDLIKRFDVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTTGRAILRLLE 359

Query: 338 SQG-AIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLN 396
             G A+   G+++       +   R + Q++FQDPY +LNPR++V   I E +  H   +
Sbjct: 360 PNGGAVSLCGENMLTAGTSALAGLRMRAQMIFQDPYDSLNPRLTVGSAIAEPMISHGLAS 419

Query: 397 DDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLD 456
             +    +  ++++VGL  D   RYP++FSGGQRQR+ IARAL L P+ I+ DE  S+LD
Sbjct: 420 ARQAPQKVAQLLEKVGLQADMAARYPHQFSGGQRQRLCIARALALNPQVIIADEALSALD 479

Query: 457 RTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENP 516
            TV+AQ+++LL DLQQ+  L YLFISHD+AV+  + H   VM  GEIVE G  Q++F +P
Sbjct: 480 MTVKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIVEIGPRQAVFNDP 539

Query: 517 SHPYTQQLV 525
            HPYT++L+
Sbjct: 540 QHPYTRRLL 548



 Score =  190 bits (482), Expect = 1e-52
 Identities = 123/271 (45%), Positives = 164/271 (60%), Gaps = 21/271 (7%)

Query: 5   VLKIDNLSVGFGI-AGQARPVT------EGVSLTIARGETLALVGESGSGKSVTANAILR 57
           VL + +L   F + +G  R VT      E VS ++  GETL+LVGESG GKS T  AILR
Sbjct: 297 VLAVRDLIKRFDVKSGWLRRVTGRVHAVENVSFSLQPGETLSLVGESGCGKSTTGRAILR 356

Query: 58  LL-PKGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLV 116
           LL P G A  L G       + L     AL G+R  R  MIFQ+P  SLNP   +G  + 
Sbjct: 357 LLEPNGGAVSLCGE------NMLTAGTSALAGLRM-RAQMIFQDPYDSLNPRLTVGSAIA 409

Query: 117 ETLAIHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPE 176
           E +  H    A  A QK  + L KVG++        YPH+ SGG+RQR+ IA AL   P+
Sbjct: 410 EPMISHGLASARQAPQKVAQLLEKVGLQADMAA--RYPHQFSGGQRQRLCIARALALNPQ 467

Query: 177 LLIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLV 236
           ++IADE  +ALD++V+AQI++LL  LQQ+LG+A LFI+HD+++V RI+ RVAVM  G++V
Sbjct: 468 VIIADEALSALDMTVKAQIVNLLLDLQQQLGLAYLFISHDMAVVERISHRVAVMYQGEIV 527

Query: 237 ETNACHTLFAAPAHPYTQQLINADPRGVPVP 267
           E      +F  P HPYT++L+ A    VPVP
Sbjct: 528 EIGPRQAVFNDPQHPYTRRLLAA----VPVP 554