Pairwise Alignments
Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 555 a.a., ABC transporter, nucleotide binding/ATPase protein (peptide) from Agrobacterium fabrum C58
Score = 403 bits (1036), Expect = e-117
Identities = 235/556 (42%), Positives = 328/556 (58%), Gaps = 44/556 (7%)
Query: 5 VLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSA 64
+L + +LSV + E +S IA GE +ALVGESG GKS TA A+ LLP ++
Sbjct: 5 LLGVRDLSVRYHSRSGEAVAVENLSFDIAAGEAVALVGESGCGKSTTALALSNLLPDEAS 64
Query: 65 HYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRG 124
SG + F +D R +A R I G RIGMIFQEPM +LNP++ +G Q+ E L H
Sbjct: 65 S--SGEVTFDGLDLFRLPPKAWRPILGPRIGMIFQEPMSALNPVYTVGDQIAEVLHAHER 122
Query: 125 LRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPT 184
L AA + +E L V + P +I +YPHELSGG+RQR MIA A+ P LLIADEPT
Sbjct: 123 LSRKAARSRVLELLDLVSMPEPHRRIASYPHELSGGQRQRAMIAQAIALTPLLLIADEPT 182
Query: 185 TALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTL 244
TALD ++Q+QIL+L+ L+++L M +L I+HDL++V R DRV VM +G+ +E L
Sbjct: 183 TALDSTIQSQILELIDRLRRDLSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEELKAEHL 242
Query: 245 FAAPAHPYTQQLINA------------------------------DPRGVPVP----TAM 270
F HPYT+ LI A + R PV T
Sbjct: 243 FQESQHPYTKGLIGASIRLGDGRHASSERLNEIRTHRNSNGTTSFEIRSPPVAAEPRTNA 302
Query: 271 DAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGKSTTGM 330
A LL+ E L V + AV ++F L +G++LGLVGESGSGKS+
Sbjct: 303 TADALLEVEDLTV-------RYDPASKTPPAVDRVTFELLRGETLGLVGESGSGKSSLSK 355
Query: 331 AILKLL-ASQGAIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVIGEGL 389
A+ +L+ + G I F GQD+ ++ +R ++Q++FQDPYS+LNPR +V ++ L
Sbjct: 356 ALSRLIPVAGGQILFEGQDITHAGGADLRAFRGRVQMIFQDPYSSLNPRRTVGDILDSVL 415
Query: 390 RVHSQLNDDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPEFILLD 449
H N + I + +V L R+P+EFSGGQRQRIAIARAL+++P ++ D
Sbjct: 416 HAHKYRNSADRQSRISEALDQVRLPRSAVERFPHEFSGGQRQRIAIARALIVRPSLVICD 475
Query: 450 EPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGET 509
EP S+LD +VQAQ+L+LL DL+++ L+YLFISHDLAV++ + +VMK G I+E G
Sbjct: 476 EPVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGNH 535
Query: 510 QSLFENPSHPYTQQLV 525
Q+L+ NPSH YT++L+
Sbjct: 536 QNLWSNPSHEYTRKLI 551
Score = 196 bits (498), Expect = 2e-54
Identities = 111/257 (43%), Positives = 158/257 (61%), Gaps = 8/257 (3%)
Query: 3 DWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKG 62
D +L++++L+V + A + P + V+ + RGETL LVGESGSGKS + A+ RL+P
Sbjct: 305 DALLEVEDLTVRYDPASKTPPAVDRVTFELLRGETLGLVGESGSGKSSLSKALSRLIPVA 364
Query: 63 SAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIH 122
G I F D LR RG R+ MIFQ+P SLNP +G L L H
Sbjct: 365 G-----GQILFEGQDITHAGGADLRAFRG-RVQMIFQDPYSSLNPRRTVGDILDSVLHAH 418
Query: 123 RGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADE 182
+ + + + E L +V R P + +PHE SGG+RQR+ IA ALI P L+I DE
Sbjct: 419 KYRNSADRQSRISEALDQV--RLPRSAVERFPHEFSGGQRQRIAIARALIVRPSLVICDE 476
Query: 183 PTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACH 242
P +ALDVSVQAQIL+LL L++E G++ LFI+HDL++V+ I+DR+ VM+ G ++E
Sbjct: 477 PVSALDVSVQAQILNLLADLKEEAGLSYLFISHDLAVVKYISDRIMVMKDGHIIERGNHQ 536
Query: 243 TLFAAPAHPYTQQLINA 259
L++ P+H YT++LI A
Sbjct: 537 NLWSNPSHEYTRKLIAA 553
Score = 157 bits (397), Expect = 1e-42
Identities = 89/236 (37%), Positives = 138/236 (58%), Gaps = 7/236 (2%)
Query: 301 AVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLL----ASQGAIRFAGQDLQALKRRE 356
AV ++SF +A G+++ LVGESG GKSTT +A+ LL +S G + F G DL L +
Sbjct: 24 AVENLSFDIAAGEAVALVGESGCGKSTTALALSNLLPDEASSSGEVTFDGLDLFRLPPKA 83
Query: 357 MLPYRS-KMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDV 415
P ++ ++FQ+P SALNP +V I E L H +L+ + ++ V +
Sbjct: 84 WRPILGPRIGMIFQEPMSALNPVYTVGDQIAEVLHAHERLSRKAARSRVLELLDLVSMPE 143
Query: 416 DTRH--RYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQK 473
R YP+E SGGQRQR IA+A+ L P ++ DEPT++LD T+Q+Q+L+L+ L++
Sbjct: 144 PHRRIASYPHELSGGQRQRAMIAQAIALTPLLLIADEPTTALDSTIQSQILELIDRLRRD 203
Query: 474 YQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLSL 529
+ L ISHDL ++ +VM G+ +E + + LF+ HPYT+ L+ S+
Sbjct: 204 LSMGLLLISHDLTLVSRWTDRVVVMHNGKRMEELKAEHLFQESQHPYTKGLIGASI 259