Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  405 bits (1042), Expect = e-117
 Identities = 232/532 (43%), Positives = 329/532 (61%), Gaps = 15/532 (2%)

Query: 1   MNDWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLP 60
           M D +L++ NLSV F  A         +S  + RGETLA++GESGSGKSV+++AI+ L+ 
Sbjct: 1   MADHLLEVRNLSVDFYTATGTVKAVRNISYHVDRGETLAILGESGSGKSVSSSAIMNLID 60

Query: 61  KGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLA 120
                  SG I     D L+ S    R + G  I MIFQ+P+  LNP++ +G Q+ E L 
Sbjct: 61  MPPGKISSGEILLNGKDLLKMSADDRRAVNGRLIAMIFQDPLSHLNPVYTVGWQMREALR 120

Query: 121 IHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIA 180
            H G+    A+ +A+    +V +  PE  ++ YPHE SGG+RQRVMIAMAL  +P LLIA
Sbjct: 121 TH-GIDNRQAQVEALRLFKRVALPEPEKAVDKYPHEFSGGQRQRVMIAMALALKPNLLIA 179

Query: 181 DEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNA 240
           DEPTTALDV+VQA++L LLK LQ+E GM +L ITHDL +V  +ADRV VM+ G LVE+  
Sbjct: 180 DEPTTALDVTVQAEVLALLKELQRETGMGVLIITHDLGVVSEVADRVVVMEKGVLVESGT 239

Query: 241 CHTLFAAPAHPYTQQLINADP-RGVPVPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYI 299
              ++  P HPYT++LI A P +G     + D   +L+    R  +   GG+        
Sbjct: 240 VREVYRNPQHPYTKKLIAAAPGKGQLHEPSTDGEPILKVRNARKSY---GGF-------- 288

Query: 300 KAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKL-LASQGAIRFAGQDLQALKRREML 358
           +A+  +SF L  G+++ +VGESGSGKST    +L+L     G   + GQDL  L   E+ 
Sbjct: 289 EALKGISFDLKAGETVAVVGESGSGKSTLARILLRLDDPDSGTAHWKGQDLFTLSPSELF 348

Query: 359 PYRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICA-VMQEVGLDVDT 417
             R  +Q+VFQDP  +LNPRM+V Q+I E   +H ++       A  A +++ VGL  + 
Sbjct: 349 KLRRDLQMVFQDPTQSLNPRMTVYQLISEAWVIHPEILPKAKWRARAAELLERVGLSPEH 408

Query: 418 RHRYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLT 477
             RYP++FSGGQRQRIAIARAL L+P+ I+ DE  S+LD +VQAQV+ LL  L+++  + 
Sbjct: 409 MGRYPHQFSGGQRQRIAIARALALEPQLIVCDEAVSALDVSVQAQVVRLLDKLRREMGIA 468

Query: 478 YLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLVRLSL 529
           ++FI+HDL ++R    + +VM+ GE+VE G    +F+NP   YTQ L+  +L
Sbjct: 469 FIFIAHDLPLVRDFADYVMVMQKGEVVEFGTVAQVFDNPQQRYTQALISATL 520