Pairwise Alignments
Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056
Subject, 511 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58
Score = 498 bits (1283), Expect = e-145
Identities = 257/502 (51%), Positives = 356/502 (70%), Gaps = 4/502 (0%)
Query: 26 EGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFGDVDTLRCSERA 85
+G+ + + +GETLA+VGESGSGKS T I+ LL S + GS + + +
Sbjct: 5 KGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLL--ASNGIIEGSAKYRGHELIGLPVNE 62
Query: 86 LRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIHRGLRATAAEQKAIEWLGKVGIRH 145
L IRG +I MIFQEPM SL+PL++IG Q+ E + HRG A + +E L VGI
Sbjct: 63 LNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLVGIPE 122
Query: 146 PEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSLQQE 205
PE +I++YPHELSGG+RQRVMIAMAL NEP++LIADEPTTALDV++QAQILDLLKSLQQ
Sbjct: 123 PERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQQR 182
Query: 206 LGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQLINADPRGVP 265
GMA++ ITHDL +VR A+RVAVM+ G++VET +F P YT+ L++A+P G
Sbjct: 183 FGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLLDAEPSGHK 242
Query: 266 VPTAMDAPTLLQAEKLRVWFPIKGGYFRRTQAYIKAVTDMSFTLAKGQSLGLVGESGSGK 325
+AP +L + + + + I GG+ ++ + +AV ++ L +GQ++G+VGESGSGK
Sbjct: 243 PAVGSEAPVVLSGKNVTIDYKIPGGFLSKSSKF-RAVDSVNVDLHQGQTIGIVGESGSGK 301
Query: 326 STTGMAILKLLASQGAIRFAGQDLQALKRREMLPYRSKMQVVFQDPYSALNPRMSVAQVI 385
ST G A+L+L+ S+G I F ++ L R+ M P R +Q+VFQDPY +L+PR +V ++I
Sbjct: 302 STLGRALLRLIVSEGRIFFGKTEITGLDRKAMRPLRRHLQLVFQDPYGSLSPRQTVGEII 361
Query: 386 GEGLRVH-SQLNDDEIDHAICAVMQEVGLDVDTRHRYPNEFSGGQRQRIAIARALVLKPE 444
EGL VH QL+ E D ++EVGLD R+RYP+EFSGGQRQRIAIARA++LKPE
Sbjct: 362 TEGLFVHEQQLSRAERDKRAIEALKEVGLDPAARNRYPHEFSGGQRQRIAIARAIILKPE 421
Query: 445 FILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYLFISHDLAVIRALCHHTIVMKAGEIV 504
++LDEPTS+LDR+VQ QV+DLL+DLQ+ + L+Y+FISHDL+VI+A+ + IVM+ G+IV
Sbjct: 422 VVILDEPTSALDRSVQGQVIDLLRDLQKAHGLSYIFISHDLSVIKAISDYVIVMRNGKIV 481
Query: 505 EHGETQSLFENPSHPYTQQLVR 526
E GET ++F P+ YT+ L++
Sbjct: 482 EEGETDAIFSRPTAEYTKTLIK 503
Score = 176 bits (447), Expect = 1e-48
Identities = 96/235 (40%), Positives = 153/235 (65%), Gaps = 10/235 (4%)
Query: 26 EGVSLTIARGETLALVGESGSGKSVTANAILRLLPKGSAHYLSGSIHFGDVDTLRCSERA 85
+ V++ + +G+T+ +VGESGSGKS A+LRL+ G I FG + +A
Sbjct: 279 DSVNVDLHQGQTIGIVGESGSGKSTLGRALLRLIVS------EGRIFFGKTEITGLDRKA 332
Query: 86 LRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIH-RGLRATAAEQKAIEWLGKVGIR 144
+R +R + ++FQ+P SL+P +G+ + E L +H + L +++AIE L +VG+
Sbjct: 333 MRPLRR-HLQLVFQDPYGSLSPRQTVGEIITEGLFVHEQQLSRAERDKRAIEALKEVGL- 390
Query: 145 HPEIKINAYPHELSGGERQRVMIAMALINEPELLIADEPTTALDVSVQAQILDLLKSLQQ 204
P + N YPHE SGG+RQR+ IA A+I +PE++I DEPT+ALD SVQ Q++DLL+ LQ+
Sbjct: 391 DPAAR-NRYPHEFSGGQRQRIAIARAIILKPEVVILDEPTSALDRSVQGQVIDLLRDLQK 449
Query: 205 ELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACHTLFAAPAHPYTQQLINA 259
G++ +FI+HDLS+++ I+D V VM++G++VE +F+ P YT+ LI +
Sbjct: 450 AHGLSYIFISHDLSVIKAISDYVIVMRNGKIVEEGETDAIFSRPTAEYTKTLIKS 504
Score = 169 bits (427), Expect = 3e-46
Identities = 93/234 (39%), Positives = 144/234 (61%), Gaps = 7/234 (2%)
Query: 299 IKAVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLLASQGAI----RFAGQDLQALKR 354
+ AV + + +G++L +VGESGSGKS T M I+ LLAS G I ++ G +L L
Sbjct: 1 MNAVKGIDIDVKQGETLAVVGESGSGKSQTMMGIMGLLASNGIIEGSAKYRGHELIGLPV 60
Query: 355 REMLPYR-SKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGL 413
E+ R +K+ ++FQ+P ++L+P + I E + H + + + +++ VG+
Sbjct: 61 NELNDIRGAKITMIFQEPMTSLDPLYRIGAQIAEPIIYHRGGSKRQARARVLELLKLVGI 120
Query: 414 DVDTRH--RYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQ 471
R YP+E SGGQRQR+ IA AL +P+ ++ DEPT++LD T+QAQ+LDLLK LQ
Sbjct: 121 PEPERRIDSYPHELSGGQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQ 180
Query: 472 QKYQLTYLFISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525
Q++ + + I+HDL V+R + VM+ GEIVE G T+ +FE P YT+ L+
Sbjct: 181 QRFGMAVVLITHDLGVVRHFANRVAVMRRGEIVETGTTEDIFERPQADYTKMLL 234