Pairwise Alignments

Query, 530 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 548 a.a., peptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  414 bits (1065), Expect = e-120
 Identities = 228/526 (43%), Positives = 326/526 (61%), Gaps = 6/526 (1%)

Query: 3   DWVLKIDNLSVGFGIAGQARPVTEGVSLTIARGETLALVGESGSGKSVTANAILRLLPKG 62
           D VL + NL+V      +     + +S  +  GE L ++GESGSGKSVTA+ I+ LL   
Sbjct: 9   DVVLSVRNLTVDLPRGMERSHAVKDISFDLHAGEILCIIGESGSGKSVTASTIMGLLSPV 68

Query: 63  SAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVETLAIH 122
                SG I F  +D L   E  +R +RG  + +IFQ+P+ +LNPL  +G Q+ E L  H
Sbjct: 69  IT-VSSGEIQFKGMDILAAKEEKIRPLRGQAVSIIFQDPLSALNPLMTVGDQVAEVLEAH 127

Query: 123 RGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPELLIADE 182
                     K +E L +VG+  P +    YP  LSGG+RQRVMIAMAL  +P++LIADE
Sbjct: 128 GVGTRETRNAKVLELLEEVGLPDPLLMRLQYPFRLSGGQRQRVMIAMALALDPDVLIADE 187

Query: 183 PTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVETNACH 242
           PTTALDV+ QAQIL+L++ +Q+   M+++FITHD  +V  IADRV VM+ G LVE     
Sbjct: 188 PTTALDVTTQAQILELIRKIQKRKNMSVMFITHDFGVVAEIADRVVVMEKGYLVEQGRAD 247

Query: 243 TLFAAPAHPYTQQLINADPRGVPVPTAMD--APTLLQAEKLRVWFPIKGGYFRRTQAYIK 300
            +   P HPYTQ+L+ A PR   V  ++D   P +L+ E L   +   G +FR+ +  +K
Sbjct: 248 QVLINPVHPYTQRLVAAVPRMRSVERSIDEEVPVVLEVENLEKEYRSSGSFFRKART-VK 306

Query: 301 AVTDMSFTLAKGQSLGLVGESGSGKSTTGMAILKLL-ASQGAIRFAGQDLQALKRREMLP 359
           AV ++SF L KGQ+LG+VGESGSGKS+ G  +LKLL    GAIRF G+D+  +       
Sbjct: 307 AVNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKLLDPDGGAIRFDGRDIATMDESAFRA 366

Query: 360 YRSKMQVVFQDPYSALNPRMSVAQVIGEGLRVHSQLNDDEIDHAICAVMQEVGLDVDTRH 419
            R  +Q++FQDP+++LNPR ++ +++  G   H     +    A+  +++ VGLD     
Sbjct: 367 LRPYIQMIFQDPFASLNPRHTIGKILTVGPLAHGMALHEARTKAL-GILKLVGLDEQAYD 425

Query: 420 RYPNEFSGGQRQRIAIARALVLKPEFILLDEPTSSLDRTVQAQVLDLLKDLQQKYQLTYL 479
           R+P+EFSGGQRQRI IARAL+  P  ++ DE  S+LD ++QAQVL+LL  +Q++ ++  +
Sbjct: 426 RFPHEFSGGQRQRIGIARALMFDPVVLVADEAVSALDVSIQAQVLELLARVQREMKVAMI 485

Query: 480 FISHDLAVIRALCHHTIVMKAGEIVEHGETQSLFENPSHPYTQQLV 525
           FI+HDL V   +C   +VM  G +VE G    +F  P+HPYTQ+LV
Sbjct: 486 FITHDLRVASQICDDVLVMHKGTVVEQGPPTKIFRAPTHPYTQKLV 531



 Score =  186 bits (471), Expect = 3e-51
 Identities = 119/272 (43%), Positives = 161/272 (59%), Gaps = 17/272 (6%)

Query: 5   VLKIDNLSVGFGIAG----QARPV--TEGVSLTIARGETLALVGESGSGKSVTANAILRL 58
           VL+++NL   +  +G    +AR V     VS  + +G+TL +VGESGSGKS     +L+L
Sbjct: 282 VLEVENLEKEYRSSGSFFRKARTVKAVNNVSFKLRKGQTLGVVGESGSGKSSLGRVLLKL 341

Query: 59  L-PKGSAHYLSGSIHFGDVDTLRCSERALRGIRGGRIGMIFQEPMVSLNPLHKIGKQLVE 117
           L P G      G+I F   D     E A R +R   I MIFQ+P  SLNP H IGK L  
Sbjct: 342 LDPDG------GAIRFDGRDIATMDESAFRALRP-YIQMIFQDPFASLNPRHTIGKILTV 394

Query: 118 TLAIHRGLRATAAEQKAIEWLGKVGIRHPEIKINAYPHELSGGERQRVMIAMALINEPEL 177
               H G+    A  KA+  L  VG+   E   + +PHE SGG+RQR+ IA AL+ +P +
Sbjct: 395 GPLAH-GMALHEARTKALGILKLVGL--DEQAYDRFPHEFSGGQRQRIGIARALMFDPVV 451

Query: 178 LIADEPTTALDVSVQAQILDLLKSLQQELGMAMLFITHDLSIVRRIADRVAVMQSGQLVE 237
           L+ADE  +ALDVS+QAQ+L+LL  +Q+E+ +AM+FITHDL +  +I D V VM  G +VE
Sbjct: 452 LVADEAVSALDVSIQAQVLELLARVQREMKVAMIFITHDLRVASQICDDVLVMHKGTVVE 511

Query: 238 TNACHTLFAAPAHPYTQQLINADPRGVPVPTA 269
                 +F AP HPYTQ+L+ A P     P+A
Sbjct: 512 QGPPTKIFRAPTHPYTQKLVAAIPGADWEPSA 543